Halobacterium noricense: LT974_01040
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Entry
LT974_01040 CDS
T07823
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
hno
Halobacterium noricense
Pathway
hno03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LT974_01040 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hno03021
]
LT974_01040 (rpoA2)
Enzymes [BR:
hno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LT974_01040 (rpoA2)
Transcription machinery [BR:
hno03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
LT974_01040 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
UHH25545
LinkDB
All DBs
Position
complement(185622..186809)
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AA seq
395 aa
AA seq
DB search
MTEITPAIRDHVEGTELPRRLKERVYDTIEGREDVTIPEAKDIATAVESQYVDTRVDPLE
PVGTVSAQSIGEPGTQMTMNTFHYAGVAEMDVTQGLPRLIELVDARKTPDTPIMTVYLED
EYAEERERAHEVVWSIEATKILALGDISTNVADMVVQIDLNEDTLQERWPLKDSTNEIAG
EIAETIEGSLGVQVTQQGTVLEFGPSEPSYRELLQLVEQLRDIVFKGIEDVSRVVIRREE
TERGEEFVLYTEGSAFKKALSIEGVDASRTSCNNIHEVHKTLGIEAAREAIIEETMTTLE
EQGLDDVNIRHLMLVADIMTNDGTIQSIGRHGISGNKDSVLARAAFEVTVSHLLDAAIYG
EADDLDGVIENVIVGKPVQLGTGDVDLRMGASKSD
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaatcacgccagcgattcgcgaccacgtcgagggcacggagctcccgcgacgc
ctcaaggaacgcgtctacgacaccatcgagggccgcgaggacgtcaccatcccggaagcc
aaggacatcgcgaccgcagtcgagtctcagtacgtcgacacgcgcgtcgaccccctcgaa
cccgtggggaccgtctccgcgcagtccatcggggagccggggacgcagatgacaatgaac
acgttccactacgcgggcgtcgcggagatggacgtgacgcagggcctgccgcggctcatc
gagctcgtggacgcccgaaagaccccggacacgcccatcatgacggtgtacctcgaagac
gagtacgccgaggagcgcgaacgcgcccacgaggtcgtgtggagcatcgaggcgacgaag
attctcgcgctcggggacatctccacgaacgtcgccgacatggtcgtccagatcgacctc
aacgaggacacgctccaggagcggtggccgctcaaggactccacgaacgaaatcgcgggc
gaaatcgccgaaaccatcgaggggagcctcggcgtccaggtcacccagcaggggaccgtc
ctggagttcggcccgagcgagccgtcgtaccgcgagctgctccagctcgtcgaacagctc
cgcgacatcgtgttcaagggcatcgaggacgtctctcgcgtcgttatccgccgcgaggag
accgagcgcggcgaggagttcgtcctctacacggaggggtcggcgttcaagaaggcgctc
agcatcgagggcgtcgacgcctcccgcacgtcgtgtaacaacatccacgaggttcacaag
accctcggcatcgaggccgcccgcgaagccatcatcgaggagacgatgaccacgctcgaa
gagcagggcctcgacgacgtgaacatccgccacctgatgctggtcgcggacatcatgacc
aacgacggcaccatccagtccatcggccgacacggcatctccgggaacaaggactccgtg
ctcgcccgcgcggcgttcgaggtgacggtcagtcacctcctggacgccgccatctacggc
gaggccgacgacctcgacggcgtcatcgagaacgtcatcgtcgggaagcccgtccagctc
ggcaccggcgacgtcgacctccggatgggcgccagcaagtccgactga
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