Halobacterium noricense: LT974_01535
Help
Entry
LT974_01535 CDS
T07823
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
hno
Halobacterium noricense
Pathway
hno03030
DNA replication
hno03420
Nucleotide excision repair
hno03430
Mismatch repair
hno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LT974_01535
03420 Nucleotide excision repair
LT974_01535
03430 Mismatch repair
LT974_01535
03440 Homologous recombination
LT974_01535
03460 Fanconi anemia pathway
LT974_01535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hno03000
]
LT974_01535
03032 DNA replication proteins [BR:
hno03032
]
LT974_01535
03400 DNA repair and recombination proteins [BR:
hno03400
]
LT974_01535
Transcription factors [BR:
hno03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
LT974_01535
DNA replication proteins [BR:
hno03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
LT974_01535
DNA repair and recombination proteins [BR:
hno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
LT974_01535
MMR (mismatch excision repair)
LT974_01535
DSBR (double strand breaks repair)
HR (homologous recombination)
LT974_01535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
OB_Ssb-like
CDC24_OB3
OB_MEIOB_N
SSB
DUF4131
Motif
Other DBs
NCBI-ProteinID:
UHH25634
LinkDB
All DBs
Position
259983..261398
Genome browser
AA seq
471 aa
AA seq
DB search
MGDDIEDVYGDLDTDVSLEEFRDAVESKVEQMGGLADEETAAMLIAHELEDGEVNGVADV
EPEMDEVKFIAKVTSVGDVRTFERDDDEDPEGRVVNVDVADETGSVRLSLWDEQAEGAKD
QLEVGDVLRVKGRPKDGYNGIEVSADQVEVDNDEEVDVPVQDEYRVEDLSLGISDVNLTG
EVLGTEEVRTFDRDDGSEGKVSNVVLGDETGRVRVTLWDDQAETATELSQGEVVEVVDGY
VRERDGSLELHVGDRGAVEPVDADVAFVPDTTPIENLELDDVADISGVIRSADPKRTFDR
DDGSEGQVRNVRVQDDTGDIRVALWGDKADLDIGPGDEVAFVDVEIQDGWQDDIEASAGW
QSSVIPLADGATTGDDGGDSSSSPTGLSAFEDGNDPSSDDADDGSSSEDGDTDDGEEVEF
TGVVVQAQNPVILDDGAETVSVETDADVTLGQEVTARGLLQDGRLRAEELH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgacatcgaggacgtctacggggacctcgacaccgacgtgtccctcgaggag
ttccgggacgccgtcgagtcgaaggtcgaacagatgggcggactggccgacgaggagacg
gccgccatgctcatcgcccacgagctcgaggacggcgaggtcaacggcgtcgcggacgtc
gaacccgagatggacgaggtgaagttcatcgcgaaggtgacgagcgtcggcgacgtgcgg
acgttcgagcgcgacgacgacgaggacccggagggccgcgtggtcaacgtcgacgtcgcc
gacgagaccggcagcgtccggctgtcgctgtgggacgagcaggccgagggtgccaaagac
caactggaagtcggcgacgtactccgcgtgaagggtcgtccgaaggacggctacaacggc
atcgaggtcagcgccgaccaggtcgaggtggacaacgacgaggaagtcgacgtcccggtg
caggacgagtaccgcgtcgaggacctctcgctgggcatctcggacgtgaacctcacgggc
gaagtgctgggcaccgaggaggtgcggacgttcgaccgcgacgacggcagcgaagggaag
gtctcgaacgtcgtgctcggcgacgaaaccgggcgcgtgcgcgtcacgctctgggacgac
caggccgagaccgcgaccgaactctcgcagggcgaggtcgtcgaggtcgtggacggctac
gtccgcgagcgcgacggcagcctcgaactccacgtcggcgaccgcggcgcggtcgagccc
gtcgacgcggacgtcgcgttcgtaccggacaccacacccatcgagaacctcgaactcgac
gacgtcgccgacatttcgggcgtcattcgctccgccgaccccaaacgtacgttcgaccgc
gacgacggcagcgaaggtcaagtccggaacgtgcgcgtgcaggacgacacgggcgacatc
cgcgtggcgctgtggggcgacaaggccgacctcgacatcggcccgggcgacgaggtggcg
ttcgtggacgtcgagattcaggacggctggcaggacgacatcgaggcgtccgcgggctgg
cagtcgtcggtcatcccgctcgcagacggcgcgacgaccggcgacgacggtggcgactcg
agcagtagtccaactggactgtcggcattcgaggacggcaacgacccgagcagcgacgac
gctgacgacggctcgtcgagcgaggacggcgacaccgacgacggcgaagaagtcgagttc
acgggcgtcgtcgtgcaggcccagaaccccgtcattctggacgacggcgcggagactgtg
agcgtggagacggacgcggacgtgacgctcgggcaggaagtgaccgcccgggggctcctc
caggacggccgcctccgcgccgaggagctacactag
DBGET
integrated database retrieval system
