Halobacterium noricense: LT974_01670
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Entry
LT974_01670 CDS
T07823
Name
(GenBank) DNA mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
hno
Halobacterium noricense
Pathway
hno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LT974_01670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hno03400
]
LT974_01670
DNA repair and recombination proteins [BR:
hno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LT974_01670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
AAA_21
MutS_III
DUF7409
IMS_HHH
AAA_28
AAA_23
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UHH25657
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Position
287338..289077
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AA seq
579 aa
AA seq
DB search
MRLEEYWGVGPKTADKLETELGVPNAVDAIESANVRALVDAGISRGRATRILRRANGGEG
MDALATDDARAVYKELVALAADYAVTPGAADRIRVRTPLTDRDEMTSRLDDVQAARETWA
RLDSETKQAVLDTFDAHDDAGDTQRAAVETALALQAAVSDDSGVFAAVTTLDRDALEDAA
EALRHLTGDGVAAGADAKLDRLRERASDLERLERDTFDVLEDVRSQGVEGTDEFREAFVQ
YVGSEAGVEPRRVRNAMTADAADAADFVSTTLRALADDVREDEQDRENEVAAELRGAISN
AREEVDAAVTAVSDLAVDVSLARFAEAHDLTRPEFVDADAIAVENARNLSLAADGGDVQP
VTYAVGDHSLDPPNGDRVTVLTGANSGGKTTLLETLCQVAVLAAMGLPVPADRAELGPVD
AVVFHRRHASFNAGVLEATLNSVVPPLAEGDRTLMLVDEFEAITEPGSAADLLHGLVTLT
VDEQALGVFVTHLADDLEPLPDVARTDGIFAEGLSQDLDLLVDYQPRFGTVGKSTPEFIV
SRLVADAGDRAERAGYETLARAVGEEAVQRTLADAEWSE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcgattagaggagtactggggggtcggcccgaagaccgccgacaaactggagaccgaa
ctcggcgtccccaacgccgtcgacgccatcgagtccgcgaacgtccgcgcgctcgtcgat
gccggcatctcgcggggccgcgcgacgcgcatcctgcggcgcgcgaacggcggcgagggg
atggacgcgctcgcgaccgacgacgcccgcgccgtctataaggaactggtcgcactcgcc
gccgactacgccgtcacgcccggcgcagcggacagaatccgcgtacggacgccgctgacc
gaccgcgacgagatgacctcgcgcctcgacgacgtgcaggccgcccgcgagacgtgggca
cgtctcgacagcgagaccaagcaagccgtcctcgacacgttcgacgcgcacgacgacgca
ggggacacacaacgcgcggcggtcgagaccgcgctcgccctgcaggccgccgtcagcgac
gactccggcgtattcgcggcggtcacgacgctcgaccgcgacgcgctcgaagacgctgcc
gaagcgctccgccacctcactggcgacggtgtggcggccggcgcggacgcgaaactcgac
cggctccgggagcgcgccagcgacctcgaacgcctcgaacgcgacacgttcgacgtgctc
gaagacgtgcgctcgcagggcgtcgagggcaccgacgagttccgcgaagcgttcgtccag
tacgtcggcagcgaggccggcgtcgaaccgcgccgcgtgcggaacgccatgaccgccgac
gccgccgacgccgcggacttcgtgagtacgacgctgcgcgcgctcgccgacgacgtccgc
gaggacgaacaggaccgcgagaacgaggtcgcggcggagcttcgaggagctatctcgaac
gcgcgcgaggaggtcgacgccgcggtgacggccgtcagcgacctcgcggtcgacgtctcg
ctcgcccggttcgcggaagctcacgacctcacgcgccccgagttcgtggacgcggacgcc
atcgccgtcgagaacgcgcgcaacctctcgctcgcagcggacggcggggacgtccagccg
gtgacgtacgcggtcggggaccactccctcgacccgccgaacggcgaccgcgtcaccgtg
ctcacgggcgcgaactccggcgggaagacgacgctgctggagacgctctgtcaggtcgcc
gtgctcgccgcgatggggctgccggtgcccgccgaccgcgccgaactcggccccgtcgac
gcagtcgtcttccaccgccgccacgcctcgttcaacgccggcgtgctggaggcgacgctg
aactccgtcgtgccgccgctggccgagggcgaccgcacgctcatgctcgtcgacgagttc
gaggccatcaccgaacccgggagcgccgccgacctcctccacggcctcgtcacgctcacc
gtcgacgagcaggcgctgggggtgttcgtcacgcacctcgcggacgacctcgaaccgctc
cccgacgtcgcgcggaccgacggcatcttcgccgaaggactcagtcaggacctcgacctg
ctcgtggactaccagccccgcttcggcaccgtcggaaagtccacgccggagttcatcgtc
tctcggctcgtcgccgatgccggcgaccgcgccgagcgggccggttacgagacgctcgct
cgcgccgtcggcgaggaagccgtccagcgcacgctcgcggacgccgagtggtccgagtaa
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