KEGG   Halobacterium noricense: LT974_01670
Entry
LT974_01670       CDS       T07823                                 
Name
(GenBank) DNA mismatch repair protein
  KO
K07456  DNA mismatch repair protein MutS2
Organism
hno  Halobacterium noricense
Pathway
hno03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    LT974_01670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hno03400]
    LT974_01670
DNA repair and recombination proteins [BR:hno03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     LT974_01670
SSDB
Motif
Pfam: MutS_V HHH_5 AAA_21 MutS_III DUF7409 IMS_HHH AAA_28 AAA_23 AAA_29 ABC_tran
Other DBs
NCBI-ProteinID: UHH25657
LinkDB
Position
287338..289077
AA seq 579 aa
MRLEEYWGVGPKTADKLETELGVPNAVDAIESANVRALVDAGISRGRATRILRRANGGEG
MDALATDDARAVYKELVALAADYAVTPGAADRIRVRTPLTDRDEMTSRLDDVQAARETWA
RLDSETKQAVLDTFDAHDDAGDTQRAAVETALALQAAVSDDSGVFAAVTTLDRDALEDAA
EALRHLTGDGVAAGADAKLDRLRERASDLERLERDTFDVLEDVRSQGVEGTDEFREAFVQ
YVGSEAGVEPRRVRNAMTADAADAADFVSTTLRALADDVREDEQDRENEVAAELRGAISN
AREEVDAAVTAVSDLAVDVSLARFAEAHDLTRPEFVDADAIAVENARNLSLAADGGDVQP
VTYAVGDHSLDPPNGDRVTVLTGANSGGKTTLLETLCQVAVLAAMGLPVPADRAELGPVD
AVVFHRRHASFNAGVLEATLNSVVPPLAEGDRTLMLVDEFEAITEPGSAADLLHGLVTLT
VDEQALGVFVTHLADDLEPLPDVARTDGIFAEGLSQDLDLLVDYQPRFGTVGKSTPEFIV
SRLVADAGDRAERAGYETLARAVGEEAVQRTLADAEWSE
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgcgattagaggagtactggggggtcggcccgaagaccgccgacaaactggagaccgaa
ctcggcgtccccaacgccgtcgacgccatcgagtccgcgaacgtccgcgcgctcgtcgat
gccggcatctcgcggggccgcgcgacgcgcatcctgcggcgcgcgaacggcggcgagggg
atggacgcgctcgcgaccgacgacgcccgcgccgtctataaggaactggtcgcactcgcc
gccgactacgccgtcacgcccggcgcagcggacagaatccgcgtacggacgccgctgacc
gaccgcgacgagatgacctcgcgcctcgacgacgtgcaggccgcccgcgagacgtgggca
cgtctcgacagcgagaccaagcaagccgtcctcgacacgttcgacgcgcacgacgacgca
ggggacacacaacgcgcggcggtcgagaccgcgctcgccctgcaggccgccgtcagcgac
gactccggcgtattcgcggcggtcacgacgctcgaccgcgacgcgctcgaagacgctgcc
gaagcgctccgccacctcactggcgacggtgtggcggccggcgcggacgcgaaactcgac
cggctccgggagcgcgccagcgacctcgaacgcctcgaacgcgacacgttcgacgtgctc
gaagacgtgcgctcgcagggcgtcgagggcaccgacgagttccgcgaagcgttcgtccag
tacgtcggcagcgaggccggcgtcgaaccgcgccgcgtgcggaacgccatgaccgccgac
gccgccgacgccgcggacttcgtgagtacgacgctgcgcgcgctcgccgacgacgtccgc
gaggacgaacaggaccgcgagaacgaggtcgcggcggagcttcgaggagctatctcgaac
gcgcgcgaggaggtcgacgccgcggtgacggccgtcagcgacctcgcggtcgacgtctcg
ctcgcccggttcgcggaagctcacgacctcacgcgccccgagttcgtggacgcggacgcc
atcgccgtcgagaacgcgcgcaacctctcgctcgcagcggacggcggggacgtccagccg
gtgacgtacgcggtcggggaccactccctcgacccgccgaacggcgaccgcgtcaccgtg
ctcacgggcgcgaactccggcgggaagacgacgctgctggagacgctctgtcaggtcgcc
gtgctcgccgcgatggggctgccggtgcccgccgaccgcgccgaactcggccccgtcgac
gcagtcgtcttccaccgccgccacgcctcgttcaacgccggcgtgctggaggcgacgctg
aactccgtcgtgccgccgctggccgagggcgaccgcacgctcatgctcgtcgacgagttc
gaggccatcaccgaacccgggagcgccgccgacctcctccacggcctcgtcacgctcacc
gtcgacgagcaggcgctgggggtgttcgtcacgcacctcgcggacgacctcgaaccgctc
cccgacgtcgcgcggaccgacggcatcttcgccgaaggactcagtcaggacctcgacctg
ctcgtggactaccagccccgcttcggcaccgtcggaaagtccacgccggagttcatcgtc
tctcggctcgtcgccgatgccggcgaccgcgccgagcgggccggttacgagacgctcgct
cgcgccgtcggcgaggaagccgtccagcgcacgctcgcggacgccgagtggtccgagtaa

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