Halobacterium noricense: LT974_02020
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Entry
LT974_02020 CDS
T07823
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hno
Halobacterium noricense
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hno03016
]
LT974_02020 (truD)
Enzymes [BR:
hno01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LT974_02020 (truD)
Transfer RNA biogenesis [BR:
hno03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LT974_02020 (truD)
Prokaryotic type
LT974_02020 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UHH25720
LinkDB
All DBs
Position
complement(352156..353508)
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AA seq
450 aa
AA seq
DB search
MRDAHELERAVGMWYYASDSDGTGGRLRESPSDFRVTEIEDFDTQPVDADRGDYPWLVLR
VTLTSWDTNDFAREFANRLGMSRERVTWAGTKDRHAVTTQLFAVRDIEPEDVPEISDAGI
DVVGRAGRGLQFGDLAGNEFRVVVRDPDDPEQADAVTADLAAFGGGEPGSRATSARSNRD
AARPAVPNFFGQQRFGSKRPITHEVGLAILRDDWEGAAMAYLGAPSEYEPEDSQRARRFV
EDTRDWEAALEEFPNRLRYERTMLHELADGGSFRDAVETFPSNLQRLFIHAAQSYAFNRM
LSERMERGLPFHEPVEGDVVWFAESDAPEGVARPDSSRQQRVTADRVDVMARHCARGRAF
VTAPLVGTDTELAEGEPGDIERAVLGELDLESGDFDLPGEFDSSGTRRAILLRPDLDVER
DPLTFDFALPSGSYATVVLREYLKSDPTDL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacgctcacgaattggaacgcgcggtcggcatgtggtactacgccagcgacagc
gacggcaccggcggccgcctccgtgagtcgccgtcggacttccgcgtcaccgaaatcgag
gacttcgacacgcagcccgtcgacgccgaccggggggactacccgtggctcgtcctgcgc
gtgacgctgacgtcgtgggacaccaacgacttcgcccgcgagttcgccaatcgcctcggg
atgagccgcgagcgcgtgacgtgggcggggacgaaagaccgccacgcggtcaccacccaa
ctgttcgccgtccgcgacatcgaacccgaggacgtccccgagatttcggacgcgggcatc
gacgtcgtgggccgcgcgggccgcggcctccagttcggcgacctcgcgggcaacgagttc
cgcgtcgtcgtccgcgacccggacgaccccgaacaggccgacgccgtcaccgcggacctc
gcggcgttcggcggcggcgaaccgggctcgcgggcgacgtccgctcgctcgaatcgggac
gctgcgcgtcccgcggtccccaatttcttcggccagcagcgcttcggcagcaagcgcccc
atcacgcacgaggtcgggctcgccatcctccgcgacgactgggagggcgcggcgatggcg
tacctcggcgcgcccagcgagtacgagccggaggacagccagcgcgcccgccggttcgtc
gaggacactcgcgactgggaagccgccttagaggagttcccgaaccggctgcgctacgag
cgcacgatgctgcacgaactggcggacggcgggagcttccgggacgccgtcgagacgttt
ccgtcgaacctccagcggctgttcatccacgccgcccagtcgtacgcgttcaaccgcatg
ctctccgagcgcatggagcgcgggctgccgttccacgagcccgtcgagggcgacgtcgtc
tggttcgcggaatcggacgcgcccgagggcgtcgcccgcccagattcgagccgccagcag
cgcgtcaccgccgaccgcgtggacgtgatggcgcgccactgcgcgcgcggccgggcgttc
gtcaccgcgccgctcgtcggcaccgacaccgaactcgccgagggtgaacccggcgacatc
gagcgcgccgtcctcggtgaactcgacctcgaatccggggacttcgacctcccgggcgag
ttcgactcctcggggacgcggcgcgcaatcctgctccgcccggaccttgatgtcgaacgc
gaccccctgaccttcgacttcgcgcttccctccgggagctacgccacggtcgtcctgcgc
gagtacctgaagtcggacccgacggacctctga
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