Halobacterium noricense: LT974_02905
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Entry
LT974_02905 CDS
T07823
Name
(GenBank) beta-CASP ribonuclease aCPSF1
KO
K07041
uncharacterized protein
Organism
hno
Halobacterium noricense
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
LT974_02905
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_7
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_6
Lactamase_B_2
KH_2
Lactamase_B_3
KH_1
KhpA-B_KH
Glyco_hydro_31_2nd
Motif
Other DBs
NCBI-ProteinID:
UHH25894
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Position
516524..518449
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AA seq
641 aa
AA seq
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MSTVDQQLEELQDQITNEIPPDISVTDVKYEGPELVVYTRDPKQFAQDGDLVRRLASKLR
KRITVRPDPAVLSRPETAREKILNVIPDDAGVTDLDFHEDTGEVVIEAEKPGMVIGRHGS
TLREITEAAGWTPEVVRTPPIESSTVSNVRNFLKSERDERRDILEKVGRQIHREEMSDDE
YVRITTLGCCREVGRASFILSTPETRILVDCGDKPGSEDEVPYLQVQEALGAGANSIDAV
VLTHAHLDHSAFIPLLFKYGYDGPIYTTEPTRDLMGLLTLDYLDVAAKEGGTPPYDSEMV
REAIKHCIPLEYGDVTDIAPDVKLTFHNAGHILGSAVSHFHIGDGLYNVAFSGDIHYEDT
RLFNGAVNDFPRVETLVLESTYGGRNDYQTDQEDSEEKLKRIINETYEDGGKVLIPAFAV
GRSQEMMLVLEEAMRKGDIPEMPIHLDGMIWEATAIHTTYPEYLRDDLRDRIFHEDENPF
LAPQFNHIDGGEEERQEVADGDQCIILSTSGMVTGGPIMSWIQHIGPDPDSTMTFVGYQA
QGTLGRRIQSGWDEIPMPDSRGSGRAERLQLEMDTETVDGFSGHADRQGLEDFVRTMNPR
PEKVLCVHGDESSTQDLSSALYHDYNMRTFAPKNLETFRFV
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgtagaccagcaactcgaagagttacaggaccagattacgaacgagattccg
ccggacatctcggtgaccgacgtgaagtacgagggccccgagctcgtcgtctacacccgg
gacccgaagcagttcgcccaggacggcgacctcgttcggcggctcgcgagcaaactccgc
aagcgcatcacggtccgccccgaccccgcggtgctctcccgcccggagaccgcccgcgag
aagattctgaacgtcatccccgacgacgccggcgtcaccgacctcgacttccacgaggac
accggcgaggtcgtcatcgaggccgagaagcccgggatggtcatcggccgccacggctcc
acgctccgcgaaatcacggaagccgcgggctggacgcccgaggtcgtgcgcacgccgccc
atcgaatcctccaccgtctcgaacgtccggaacttcctcaagtccgagcgcgacgagcgc
cgcgacatcctggagaaggtcggccgccagattcaccgcgaggagatgagcgacgacgag
tacgtccgcatcaccacgctgggctgctgccgcgaggtcggccgcgcgagcttcatcctc
tcgacgcccgagacgcgcatcctcgtcgactgcggcgacaagcccgggagcgaggacgaa
gtcccctacctccaggtgcaggaggcgctgggcgcgggcgcgaactccatcgacgcggtc
gtgctcacgcacgcccacctcgaccactccgcgttcatcccgctactcttcaagtacggc
tacgacggccccatctacaccacggagccgacccgtgacctcatgggcctgctgacgctg
gattacctcgacgtcgccgccaaggaggggggcacgcccccgtacgactccgagatggtt
cgcgaagccatcaagcactgcatcccgctggagtacggcgacgtcacggacatcgcgccg
gacgtgaagctcacgttccacaacgccggccacatcctcgggagcgcggtctcgcacttc
cacatcggcgacggcctctacaacgtcgcgttctccggcgacatccactacgaggacacg
cggctgttcaacggcgcggtcaacgacttcccgcgcgtggagacgctcgtcctcgaatcc
acgtacggtgggcgcaacgactaccagaccgaccaggaggactccgaggagaagctcaaa
cgcatcatcaacgagacctacgaggacggcgggaaggtcctgattccggcgttcgcggtc
gggcgctcccaggagatgatgctcgtcctcgaagaggcgatgcggaagggcgacatcccc
gagatgcccatccacctcgacggcatgatttgggaggcgaccgccatccacaccacctac
cccgagtacctccgcgacgacctccgcgaccgcatcttccacgaggacgagaacccgttc
ctcgcgccccagttcaaccacatcgacggcggcgaggaggaacgccaggaggtcgccgac
ggcgaccagtgtatcatcctctccacctcggggatggtcaccggcggccccatcatgtcc
tggattcagcacatcggcccggacccggattcgacgatgacgttcgtcggctaccaggcc
caggggacgctcggccgccgtatccagtccggctgggacgagattccgatgcccgactcc
cgcggcagcggccgcgcggagcgcctccagctcgagatggacaccgagaccgtcgacggc
ttctccgggcacgccgaccggcagggcctcgaggacttcgtgcgcacgatgaacccccgc
cccgagaaggtgctgtgcgtgcacggcgacgagtcctccacgcaggacctctccagcgca
ctctaccacgactacaacatgcggacgttcgcgccgaagaacctcgaaacgttccgcttc
gtctag
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