Halobacterium noricense: LT974_03110
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Entry
LT974_03110 CDS
T07823
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hno
Halobacterium noricense
Pathway
hno00100
Steroid biosynthesis
hno00909
Sesquiterpenoid and triterpenoid biosynthesis
hno01100
Metabolic pathways
hno01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
LT974_03110
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
LT974_03110
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hno01006
]
LT974_03110
Enzymes [BR:
hno01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
LT974_03110
Prenyltransferases [BR:
hno01006
]
Terpene biosynthesis
Squalene/phytoene synthase
LT974_03110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF7108
DUF6891
Motif
Other DBs
NCBI-ProteinID:
UHH25935
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All DBs
Position
complement(556739..557788)
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AA seq
349 aa
AA seq
DB search
MVGGHPQSPQPATDERAWCHDAVQDVSRTFALTIDALEEPMATRICVGYLLCRVADTVED
ATSIPPAEQAALLRTYDRVLDPGDETGIAAFQEDVEPHLPAELDADWTVVAEASRVLRAF
ESLDADAQAAIRPTVREMTTGMASFVERYAEDGGLRIQSVEELEEYCWYVAGTVGELVTE
LLAADAAREEAATMREHARSFALLLQLVNVAKDVRPDYHEENNVYLPASWLDEAGVDPDA
VADPSNADGVGSVVERVVDRARGYADGAQRWLEAMPTTSGNTLAAWTVPYLLAVGTMREL
RSRPGDVVVDGDVKVSRDEVHAVLARVTDDFDRAALDRLRERIASQSLA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggtcggaggccacccacagtccccccagcccgcgaccgacgagcgcgcgtggtgccac
gacgccgtgcaggacgtctcccgcacgttcgcgttgactatcgacgcgctcgaagagccg
atggcgacgcgcatctgcgtcggctacctgttgtgccgcgtggcggacaccgtcgaggac
gccacgtcgataccgcccgccgagcaggccgcgctcctgcggacgtacgaccgcgtactc
gaccccggcgacgagacgggtatcgcggcgttccaggaggacgtggagccacacctgccg
gccgaactggacgccgactggacggtcgtcgccgaggcctcgcgggtcctgcgggcgttc
gagagcctcgacgcggacgcgcaggccgcgattcggccgaccgtccgcgagatgacgacg
gggatggcgtcgttcgtggagcggtacgccgaggacggcggcctccgcatccagtccgtg
gaggaactcgaggagtactgctggtacgtggcggggacggtgggggaactcgtcacggaa
ctactggcggcggacgcggcccgcgaggaggcggcgacgatgcgcgagcacgcgcggtcg
ttcgcgcttctcctccagttggtgaacgtcgccaaagacgtccggccggactaccacgag
gagaacaacgtctacctgccggcatcgtggctggacgaggcgggtgtcgacccggacgcg
gttgcggacccgtcgaacgccgacggcgtggggagcgtcgtcgagcgcgtcgtcgaccgc
gcacgggggtacgcggacggcgcgcagcggtggctggaggcgatgccgacgaccagcggg
aacacgctggcggcgtggacggtgccgtacctgctggcggtcgggacgatgcgggaactc
cgaagccgacccggggacgtcgtcgtggacggcgacgtgaaggtctcgcgcgacgaggtg
cacgcggtgctggcgcgcgtcacggacgacttcgaccgggcggcgctggaccgcctgcgc
gagcgcatcgcgagccagtcgctggcctga
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