Halobacterium noricense: LT974_03950
Help
Entry
LT974_03950 CDS
T07823
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hno
Halobacterium noricense
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hno03400
]
LT974_03950
DNA repair and recombination proteins [BR:
hno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LT974_03950
Archaeal homologous recombinant proteins
LT974_03950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
CCDC39
AAA_13
AAA_21
AAA_29
AAA_27
DUF1664
ABC_ATPase
Mod_r
CENP-F_leu_zip
OVT1
DUF3450
DUF7121
Snapin_Pallidin
APG6_N
ZnF_RZ-type
MukB
ATG14
BLOC1_2
CC_Bre1
ABC_tran
COG3_N
Laminin_II
Uso1_p115_C
Motif
Other DBs
NCBI-ProteinID:
UHH26091
LinkDB
All DBs
Position
complement(705534..708197)
Genome browser
AA seq
887 aa
AA seq
DB search
MRFTRVSLRNFKCYEDADVRLDRGVTVIHGLNGSGKSSLLEACFFALYGASALDKTLDEI
VTIGAEEAEIDLWFTHAGNDYHVHRRVRNTGERASTPDCTLETPSGSIDGVTDVEEYVGD
LLRMDAEAFVNCAYVRQGEVNKLINASPSTRQDMLDDLLQLGKLEDYRQRAGDARLGVED
VKSNVAGKLDQLDEQIEAKEAENPHDMLASLQSELADVTEDIENYEDQRETARETLEDAE
SVLDAYEEKRAELDDVAETISDVREAIAETEREREELADEIGEHREQADDLEAEADDLVA
ETELDEADAGAAEAKREELAARRDRVSEQAQEAGQEMSGVKQQADNAAERSDDLEARAAD
LREAADELESEVEELDAEREEAIERIEELDEEIAEAKAAFEDAPVEFGNAEAYLDSLNAD
LDDLRERREGVRADLRSAEDRVEEAEELLDAGKCPECGQPIEGSPHVESVEEYRERVADL
EAELETIEADVEDVTERIDRTEGLVEREREVADLERNRELAVERREDREDAASEAHEEAE
AKREQADDLEAEAEDAREEAESKREQAEAKREELAELNAEQSTLKERIERLADLADVLEE
AADHRDAADQLAEKRASLDDRNGERRDRLSDLRERKQRLEADFDEDRIKAAKADKERAED
YLEQVEPKLDDLHERRDELQGQIGAAENAIEELEALRDQRETVAARLDELQEIHDEVSEL
ESTYGDLRAELRQQNVAKLERLLNETFELVYQNDSYARIELSGDYELTVYQKDGEPLEPE
QLSGGERALFNLSLRCAIYRLLAEGIDGEAPLPPLILDEPTVFLDSGHVSQLVELVEQMR
RMGVEQIVVVSHDDELVDAADDVVRVEKDATTNRSRVVRDPEEVLAD
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
gtgagattcacgcgcgtctccctacggaacttcaagtgctacgaggacgcggacgtgcgc
ctcgaccgcggggtcacggtcatccacgggctgaacggcagcgggaagtccagcctccta
gaggcctgcttcttcgcgctgtacggcgcgagcgccctcgacaagacgctcgacgaaatc
gtcaccatcggcgcggaggaagccgaaatcgacctctggttcacgcacgcgggcaacgac
taccacgtccaccgccgcgtccggaacacgggcgaacgcgcctcgacgccggactgcacg
ctcgaaacgccctcggggagcatcgacggcgtcaccgacgtcgaggagtacgtcggcgac
ctgctgcggatggacgcggaggcgttcgtgaactgcgcgtacgtccggcagggcgaggtg
aacaagctcatcaacgcgtcgccgagcacgcgccaggacatgctcgacgacctgctccag
ctcggaaagttggaggactaccgccagcgcgccggcgacgcgcgactcggcgtggaggac
gtcaagagcaacgtcgcggggaagctcgaccagctcgacgagcaaatcgaggccaaggaa
gccgaaaatccccacgacatgctcgcgagtctgcagtccgaactcgcggacgtcaccgag
gacatcgagaactacgaggaccagcgcgagaccgcccgcgagacgctcgaggacgccgag
agcgtcctcgacgcctacgaggagaagcgcgcggaactggacgacgtcgcggagacgatt
agcgacgtccgggaggccatcgcggagaccgagcgcgaacgggaggaactcgccgacgaa
atcggcgagcaccgcgagcaggccgacgacctcgaagccgaggccgacgatttggtcgcg
gagaccgaactggacgaggcggacgcaggggccgcggaagcgaagcgcgaggaactcgcc
gcacggcgggaccgcgtgagtgagcaggcacaggaagcaggccaagaaatgagcggcgtg
aagcagcaggccgacaacgctgccgagcgttcggacgacctcgaagcgcgcgccgcggac
ctccgggaggcggccgacgaactcgaaagcgaggtcgaggaactcgacgcagagcgcgag
gaagccatcgagcgcatcgaggagttggacgaggaaatcgccgaggcgaaggcggcgttc
gaggacgcgccagtcgaattcgggaacgccgaagcatacctcgactcgctgaacgcggac
ctcgacgacctccgggagcgccgcgaaggcgtgcgcgcggacctccggtccgccgaggac
cgcgtcgaagaagctgaggagctactggacgccgggaagtgcccggagtgcggccagcca
atcgaggggtcgccgcacgtcgagagcgtcgaggagtaccgcgagcgcgtcgcggacctc
gaagccgaactggaaaccatcgaggcagacgtcgaggacgtcaccgagcgcatcgaccgc
accgagggcctcgtggagcgcgagcgcgaggtcgcggacctcgaacgcaaccgcgagttg
gccgtcgagcgccgcgaggaccgtgaggacgccgcgagcgaagcgcacgaggaagccgaa
gccaagcgcgagcaggccgacgacctcgaagccgaggccgaggacgctcgtgaggaagcc
gaaagcaagcgcgagcaggccgaagccaagcgcgaggaactcgcggagttgaacgccgaa
cagtccacgctcaaggagcgcatcgagcggttggccgacctcgcggacgtgctggaggag
gccgccgaccaccgcgatgccgccgaccaactcgcggagaagcgcgcgagcctcgacgac
cgaaacggcgagcgccgcgaccgcctgagcgacctccgggagcgcaagcagcgcctcgaa
gccgacttcgacgaggaccgcatcaaggcggcgaaggcggacaaggagcgcgccgaggac
tacctcgaacaggtcgaacccaagctggacgacctccacgagcgccgcgacgagctacag
ggccagattggcgcggcggagaacgccatcgaggaactggaagcgctgcgcgaccagcgc
gagacggtcgccgcgcgcctcgacgaactccaggagattcacgacgaggtctccgaactg
gagtcgacgtacggcgacctgcgcgcggaactgcgccagcagaacgtcgcgaaactggag
cgcttgctgaacgagacgttcgagctggtgtatcagaacgactcgtacgcccgcatcgaa
ctctcgggggactacgaactcaccgtctaccagaaggacggcgaacccctcgaacccgag
cagctgtcgggcggggagcgcgcgctgttcaatctcagcctgcgctgcgccatctaccgg
ctgctcgcggagggcatcgacggcgaagcgccgctcccgccgctcatcctcgacgaaccc
acggtgttcctcgattcggggcacgtctcgcagctcgtcgaactggtcgagcagatgcgc
cgcatgggcgtcgagcagatcgtcgtggtgagccacgacgacgaactcgtggacgccgcc
gacgacgtggtgcgcgtggagaaggacgcgacaacgaaccggtcgcgcgtggtgcgcgac
cccgaggaagtgctggcggactag
DBGET
integrated database retrieval system
