Halobacterium noricense: LT974_05110
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Entry
LT974_05110 CDS
T07823
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hno
Halobacterium noricense
Pathway
hno03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LT974_05110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hno03021
]
LT974_05110
Transcription machinery [BR:
hno03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
LT974_05110
Prokaryotic type
Archaeal type
TFB
LT974_05110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Cyclin_C
A2L_zn_ribbon
Anti-TRAP
Sigma70_r4
Zn_ribbon_LysW
Zn_ribbon_tTFIIB
Auto_anti-p27
HypA
DUF7560
BRF2-like_C_cyclin_rpt
DZR
HTH_Tnp_ISL3
DUF8054_C
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
UHH26317
LinkDB
All DBs
Position
922982..923965
Genome browser
AA seq
327 aa
AA seq
DB search
MSDTTRTREKREEAESESEESTEEVDADLHCPECGGRLVVDEERGETVCEDCGLVVEEET
IDRGPEWRAFGSEESDQKSRVGAPTTNLMHDKGLSTNIGWQDKDAYGNSLSSRQRQKMQR
LRKWNERFRTRTSKERNLKQALGEIERMASALGLPKNVRETASVIYRRALNDDLLPGRSI
EGVATSALYAAARQAGAPRSLDEVANVSRVERDEIARTYRYVARELGLEVAPTDPASYVP
RFCSELGLSDEVERRARDLLESAEKAGLYSGKSPVGLAAAAVYAASLLVDERITQSQVSD
VANVSEVTIRNRYHEILEAGGEANVEA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccacgcgaacccgcgagaagcgcgaggaagccgagagcgagagcgaggag
tccacagaggaggtcgacgccgacctccactgccccgagtgcggcggccgcctcgtcgtc
gacgaggagcgcggcgagacggtctgcgaggactgcgggctcgtcgtcgaggaggagacc
atcgaccgcgggcccgagtggcgcgcgttcggcagcgaggagagcgaccagaagtcccgc
gtcggcgcgcccaccacgaatctgatgcacgacaagggattgtcgacgaacatcggctgg
caggacaaggacgcctacggcaacagcctctccagccgccagcgccagaagatgcagcgg
ctccgcaagtggaacgagcgcttccgtacgcgcacctcgaaggaacgcaatctgaagcaa
gccctcggcgaaatcgagcggatggcctccgcgctcggtctcccgaagaacgtccgcgag
acagcctccgtcatctatcgccgcgcgctcaacgacgacctgctccccggccgcagcatc
gagggcgtcgccacgagcgcgctgtacgcggccgcgcggcaggcgggcgcaccccgcagt
ctcgacgaggtggcgaacgtcagccgcgtcgaacgggacgaaatcgcgcgcacctaccgc
tacgtcgcccgcgaactcggcctcgaagtcgcgcccacggaccccgccagctacgtcccg
cggttctgctcggaactcgggctctccgacgaagtcgagcgccgcgctcgcgaccttctg
gagagcgccgaaaaggcaggcctctactcagggaaatccccggtcgggctcgcggctgcg
gccgtctacgccgccagcctcctcgtggacgaacgcatcacgcagagtcaggtcagcgac
gtcgcaaacgtcagcgaagtcaccatccgcaaccgctaccacgagattctggaggccggc
ggcgaggcgaacgtcgaagcctga
DBGET
integrated database retrieval system
