Halobacterium noricense: LT974_09425
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Entry
LT974_09425 CDS
T07823
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hno
Halobacterium noricense
Pathway
hno03022
Basal transcription factors
hno03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LT974_09425
09124 Replication and repair
03420 Nucleotide excision repair
LT974_09425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hno03021
]
LT974_09425
03036 Chromosome and associated proteins [BR:
hno03036
]
LT974_09425
03400 DNA repair and recombination proteins [BR:
hno03400
]
LT974_09425
Enzymes [BR:
hno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LT974_09425
Transcription machinery [BR:
hno03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LT974_09425
Chromosome and associated proteins [BR:
hno03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LT974_09425
DNA repair and recombination proteins [BR:
hno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LT974_09425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
AAA_22
PhoH
AAA_11
AAA_30
Cortex-I_coil
SNF2-rel_dom
Utp25_C
RecX_HTH1
nSTAND3
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
UHH24212
LinkDB
All DBs
Position
complement(1800128..1802524)
Genome browser
AA seq
798 aa
AA seq
DB search
MGDDDWRDFFGFDEPYDQQADAIGAAIDAGERGGYLAMEGPCGTGKTMAALTAAAQLVRR
TDDYERVFVVTPVKQQLQQFVADLRQMNAGLDEPLNGVALVGKRDLCPYGREDVFPRDAS
VHDRCEDLRESTAGLVEADGEGGSFDGQDAGELVDLRAADALDDPWWDPAKARDLARSAR
ADANHNLSENPLRTDGADSPYVPVQPSAPEEFADGDPPLFCPFEADWYGRNKGSPVGFDV
GDYNVVTSEDFLPAAVEYGTCPHRVQQVMLDHADVVIGNYNHLFDPQTRGLTEHLLDEQT
FVVVDEAHRLEERVRDLLSDRVGRHTLARARNDLRQLLTTAKQSESNRQQVRDELQSYEV
TLDAIEEAVEFLGDVSEWLDDRVAEYLAEEGHDPNRPRDLPEHDHEIPLRDPETDEPDDL
TRWAEQEGYTGGLWRSLADIGTAVAAILEDDGDRSAVCGAVGITLQRWWERDHATYFREI
ELEHAPKESGRAGAAWAETYTPALVTYNCMPARALRETFAGLGGGVLMSATLEPLDVFRE
VTGLDRLEAGAGDAEARPVVERRYDLRFPEENRASFTVDATPFTARNRGDPTSENANQTR
EQYRYVLRTIARSPGNVLVCMPNYREAAWAGDYLEGAVEKPVLVDESSSNEDTDALKRQF
FRGDGKVMVTSTRGTLTEGVDYDGDKLAACAVVGVPLVNVGSPRVRAVRRAYADAFGEDH
AFEYALTVPAVRRARQAIGRVIRGPEEVGVRAFVGQRYVEGARHSVFEYLGPGEREEFTR
MTPEFLGDQLDLFWSEHA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgacgactggcgcgacttcttcgggttcgacgagccctacgaccagcaggcc
gacgccatcggcgcggccatcgacgccggcgagcgcggcggctacctcgcgatggagggg
ccctgcggcaccgggaagacgatggcggcgctgacggcggccgcccagctcgtgcgccgc
accgacgactacgagcgcgtgttcgtcgtcacccccgtgaaacagcagctccagcagttc
gtcgcggacctccggcagatgaacgccgggctggacgagccgctgaacggcgtcgcgctc
gtcgggaagcgcgacctctgtccgtacggccgcgaggacgtgttcccgcgggacgccagc
gtccacgaccgctgcgaggacctccgcgagtcaaccgcgggcctcgtggaggccgacggc
gagggcggcagcttcgacggacaggacgcgggcgaactcgtggacttgcgtgccgcggac
gcgctcgacgacccgtggtgggaccccgcgaaagcccgcgacctcgcacggtcggcgcgc
gcggacgccaaccacaatctctcggagaaccccctcagaactgacggcgcggactcgccg
tacgtgcccgtgcagccgagcgcacccgaggagttcgccgacggcgacccgccgctgttc
tgcccgttcgaggccgactggtacggacggaacaagggctcgcccgtcggtttcgacgtc
ggcgactacaacgtcgtcacgagcgaggacttcctccccgccgccgtcgagtacggcacc
tgcccgcaccgcgtccagcaggtcatgctcgaccacgcggacgtcgtcatcgggaactac
aaccacctcttcgacccgcagacgcgcgggctcaccgaacacctgctcgacgagcagacg
ttcgtcgtggtggacgaagcccaccgcctggaggagcgcgtgcgcgacctcctctcggac
cgcgtaggccgacacacgctcgctcgcgcacgaaacgacctccggcagttgctcacgacg
gccaagcagagcgagtcgaaccgccaacaggtccgggacgaactgcagagctacgaggtc
accctcgacgccatcgaggaggccgtggagttcctcggcgacgtctcggagtggctcgac
gaccgcgtcgccgagtacctcgccgaggagggccacgacccgaaccggccccgcgacctc
ccggagcacgaccacgagattccgctccgtgaccccgagaccgacgagcccgacgacctc
acgcgctgggccgaacaggagggatacacgggcggcctgtggcggtcgctggcggacatc
ggcaccgcggtcgcggcgattctggaggacgacggcgaccgctcggcggtctgtggcgca
gtcggcatcaccctccagcggtggtgggagcgcgaccacgcgacgtacttccgggaaatc
gagctcgagcacgcgcccaaagagtccgggcgggccggcgcggcgtgggcggagacgtac
acgcccgcgctcgtgacgtacaactgcatgccggcgcgcgcgctccgcgaaacgttcgcg
ggactgggcggcggcgtgctgatgagcgcgacgctggaaccgctcgacgtcttccgcgag
gtgacgggtctcgacaggctggaagcgggtgccggcgacgcggaagcccggccggtcgtg
gagcgccgctacgacctgcggttccccgaggagaaccgcgcgagcttcaccgtggacgcg
acgccgtttacggcacgcaaccgcggcgacccgaccagcgagaacgccaatcagacccgc
gagcagtaccgctacgtcctccgcactatcgcgcgctcgccggggaacgtcctcgtctgc
atgccgaactaccgggaggcggcgtgggccggcgactacctagagggagccgttgagaag
cccgtgctcgtcgacgagtcctcctcgaacgaggatacggacgcgctcaagcgccagttc
ttccgcggcgacggcaaagtcatggtgacgagcactcgcggcacgctcacggagggcgtc
gactacgacggcgacaaactcgcggcgtgcgccgtggtgggcgttccgctcgtgaacgtc
gggtcgccgcgcgtgcgggcagtccggcgggcgtacgcggacgcgttcggcgaggaccac
gccttcgagtacgcgctgacggtgccggcggtgcggcgcgcgcggcaggccatcgggcgc
gtgattcgtggcccggaggaagtcggtgtgcgggcgttcgtcggccagcgctacgtcgag
ggcgcgcgccactccgtcttcgagtacctcggtcccggcgagcgcgaggagttcacgcgc
atgacgccggagttcctcggcgaccagctagacctgttctggagcgagcacgcctag
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