Halobacterium noricense: LT974_10130
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Entry
LT974_10130 CDS
T07823
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hno
Halobacterium noricense
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hno03009
]
LT974_10130
Ribosome biogenesis [BR:
hno03009
]
Prokaryotic type
ribosomal protein modification factors
LT974_10130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
UHH24345
LinkDB
All DBs
Position
1927749..1929449
Genome browser
AA seq
566 aa
AA seq
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MTVAVVGDGPAVEAVRDALTDVDAAVEAADVAGVADAEFAVVVGVAGSGGFGTANEHARS
GDTPLLTVEVGGLGGRPLAAVDAGVSLLAPEGPCFECLAARVTATGHEPAESPSADRSAV
RLAGAHAGRLAVDALRGDAAPGTVLELPHAERTLAPVPNCSCADDGPNSDLPPGDEDRSL
DDALAAAEPLVDDRVGVLSAVGERESFPAPYYLAVGTDTSPFSDAEASTQSAGVAADWNT
AYMKAVGEGFERYAAGVYRTDDFETAPVDHEDAVPPERFVRPEDAGSEVDEIEWVRGQNI
DSKDAALLPADRVVFPPPEERPGTITTGLGLGNSGVGAVLSGLYETVERDATMLSWYSTF
DPLGLQVDDPEFDELERRASAENLDVTALLCTQDVDVPVVAVAVHRDEWPRFALGSAADL
DADAAARDALCEALQNWMELRAMGPEQAATEDGAIGKYADFPRDVRGFVDPGTTIPASDV
GPDDPPEGTDELDAVLDALADADLDAYAARLTTRDLEDAGFEAVRVLVPEAQPLFVDESY
FGERAREVPRELGFQARLDKPFHPFP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcgccgtcgtcggcgacggcccggccgtcgaagccgtccgagacgcgctcacg
gacgtcgacgccgctgtcgaagccgcggacgtcgctggcgtcgccgacgcggagttcgcc
gtcgtcgtcggcgtcgccggctccggcgggttcggcactgcgaacgagcacgcccgaagc
ggagacacgccgctgctcaccgtcgaggtcggcgggctcggcggccgcccgctcgcagcc
gtcgatgcgggcgtctccttgctcgctccggaggggccgtgtttcgaatgtttagcggcg
cgcgtgaccgcgacaggccacgaaccggcggaatcgccgagcgccgatcggagtgcagtg
cggctcgccggcgcgcacgccggccgcctcgccgtcgacgcgctccgcggggacgccgca
cccggaactgtcctcgaactcccgcacgccgagcgaacgctcgcacccgtcccgaactgc
tcgtgtgcggacgacgggccgaacagcgacctcccgccaggcgacgaagaccggtcgctg
gacgacgcgctcgccgccgccgaaccgctggtcgacgaccgcgtcggcgtgctctcggcg
gtcggcgaacgcgagtcgttccccgcgccgtactacctcgccgtgggcaccgacacgtcg
ccgttcagcgacgccgaagcctcgacgcaatcagcgggcgtcgccgccgactggaacacc
gcctacatgaaggccgtcggcgagggcttcgagcgctacgccgccggcgtctaccgcact
gacgacttcgagactgcgcccgtcgaccacgaggatgcagtgccacccgagcgcttcgtc
cgccccgaagatgcgggcagcgaggtggacgaaatcgagtgggtgcgcggccaaaatatc
gactcgaaggacgcggcgctgctccccgcggaccgcgtcgtcttcccgccacccgaggaa
cggccgggaacgattacgaccggcctcggcctcggcaactccggcgtcggcgcggtgctg
tcgggcctctacgagaccgtcgaacgcgacgccacgatgctgtcgtggtactccacgttc
gacccgctcggcctccaggtcgacgaccccgagttcgacgagctcgaacgccgcgcgagc
gccgagaacctcgacgtcacggcgctgctgtgcacgcaggacgtcgacgtccccgttgtc
gcggtcgcagtccaccgcgacgagtggccgcggttcgcgctcgggtccgccgccgacctc
gacgccgacgccgccgcccgcgacgcgctctgcgaagccctccagaactggatggaactg
cgcgcgatgggccccgagcaagccgcgacggaggacggcgctatcggcaagtacgccgac
ttcccccgcgacgtccgcggcttcgtcgaccccggcaccaccatccccgccagcgacgtc
ggccccgacgacccgccggagggaaccgacgaactcgacgccgtcctcgacgcgctcgcg
gacgccgacctcgacgcctacgccgcccggctcacgactcgtgacttggaggacgcgggc
ttcgaggctgtgcgggtgttagtgccggaagcccagccgctgttcgtcgacgagtcgtac
ttcggggagcgtgcgcgtgaggttccccgtgaactcggctttcaggcgcggttggacaag
ccgttccatccgttcccgtag
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