Halobacterium noricense: LT974_11085
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Entry
LT974_11085 CDS
T07823
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hno
Halobacterium noricense
Pathway
hno03022
Basal transcription factors
hno03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LT974_11085
09124 Replication and repair
03420 Nucleotide excision repair
LT974_11085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hno03021
]
LT974_11085
03400 DNA repair and recombination proteins [BR:
hno03400
]
LT974_11085
Enzymes [BR:
hno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LT974_11085
Transcription machinery [BR:
hno03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LT974_11085
DNA repair and recombination proteins [BR:
hno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LT974_11085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_22
AAA_30
AAA_5
AAA
AAA_11
MarR_2
HTH_13
AAA_25
AAA_33
HTH_20
TrmB
TMP_2
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UHH24525
LinkDB
All DBs
Position
complement(2086913..2088712)
Genome browser
AA seq
599 aa
AA seq
DB search
MTDISKEAFHDALEAVGRPVATAAQVARELDCTQAAAADALAELAESGDVERADVENDPV
VWYPRDWLELTDRERVVPFPDRREIVVDQPAQFTRAQLSRFAHLADTTRTGSYRYVVREE
DVWAAPFESLDDLLAAMDRVLPRDCPGLKDWVEEQWTRATRFRLVTHEDGYVVLEAKTES
LLGNVADQHLADDVIRAPISDTEAWVAENKVAELKRTLYEAGYPVQDERDLETGESLDVD
LDLGLRDYQQDWVERFVDASSGVLVGPPGSGKTVAAMGVLEAVGGETLILVPSRELAAQW
REELLAHTNLERDQIGEYHGGTKHVRPVTIATYQTAGMDRHRHVFDDREWGLVVYDEVHH
IPAEVARRSADLQSKHRLGLTATPVREDDKEEDIYTLVGPPIGTDWDALFDAGYVAEPTV
EIRYVPWRDDDARYEYAAESGHTRRRLAAENPAKDEEVQHLLRQHGDKQALVFVDYLEQG
ERLSAAIDAPFVSGETRHAEREALFDRFRTGALNTLVVSRIGDEGIDLPDAELAIVASGL
GGSRRQGAQRAGRTMRPGGQSLLFVLATRGTEEEDDARSRMRHLAAKGVRVTESGSEQA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacatctccaaggaggcgttccacgacgccctcgaagccgtgggtcggcccgtc
gcgaccgccgcgcaggtcgcccgggagctcgactgcacgcaggcggcggctgccgacgcc
ctcgccgaactcgctgaatcgggtgacgtggagcgcgcggacgtggagaacgacccggtc
gtgtggtatccgcgggactggctggaactgacggaccgcgagcgggtcgtgccgttcccg
gaccgccgggaaatcgtcgtcgaccagcccgcgcagttcacgcgcgcccagttgtcgagg
ttcgcgcacctcgcggacaccactcgcacgggcagctaccggtacgtggtgcgcgaggag
gacgtgtgggcggcaccgttcgagagcctggacgacttgctggcggcgatggaccgcgtg
ctcccgcgggactgccccgggctgaaggactgggtcgaagagcagtggacgcgcgcgacg
cgcttccggctcgtcacgcacgaggacggctacgtcgtcctcgaagcgaagaccgagagc
ctgctcgggaacgtcgccgaccagcacctcgccgacgacgtgattcgcgcgcccatctcg
gacacggaggcgtgggtcgccgagaacaaggtcgcggaactgaagcgcacgctctacgag
gccggctaccccgtccaggacgagcgcgacctcgagaccggcgaatccctggatgtcgac
ctcgacctcggcctccgggactaccagcaggactgggtggagcgcttcgtcgacgcgagt
tcgggcgtgctcgtcgggccgccgggctccgggaagaccgtcgccgcgatgggcgtgctc
gaagccgtcggcggcgagacgctgattctggtgccgagtcgcgaactcgcggcgcagtgg
cgcgaggagttgctcgcgcacacgaacctcgaacgcgaccagatcggggagtaccacggc
ggcacgaagcacgtgcgccccgtcaccatcgctacctaccagaccgcggggatggaccgc
caccgccacgtcttcgacgaccgggagtgggggctcgtcgtctacgacgaagtccaccac
atccccgcggaggtcgcgcgccggtcggcggacctccagagcaagcaccgcctcgggctc
accgcgacgccggttcgcgaggacgacaaggaggaggacatctacacgctcgtcgggccg
cccatcggcaccgattgggacgcgctgttcgacgcgggctacgtcgccgaacccaccgtc
gagattcggtacgtgccgtggcgcgacgacgacgcacgctacgagtacgccgccgagagc
gggcacacgcgccgccggctcgccgccgagaaccccgcgaaagacgaggaggtgcaacac
ctgctgcgccagcacggcgacaagcaggcgctcgtgtttgtggactacctcgaacagggc
gaacggctctcggcggccatcgacgcgccgttcgtcagcggggagacccgccacgccgaa
cgggaggcgctgttcgaccgattccgcacgggtgcgttgaacacgctcgtcgtctcccgc
atcggcgacgagggcatcgacctgccggacgccgaactcgccatcgtcgcctcggggctg
ggcggcagccgccggcagggtgcccagcgcgccggccggacgatgcgtccgggtggccag
tcgcttttgttcgtgctcgcgacgcgcgggaccgaggaggaggacgacgcccgcagccgg
atgcgtcacctcgccgcgaagggcgtccgcgtcacggagtccggcagcgagcaggcctga
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integrated database retrieval system
