Halobacterium noricense: LT974_13360
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Entry
LT974_13360 CDS
T07823
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hno
Halobacterium noricense
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hno03016
]
LT974_13360 (truA)
Enzymes [BR:
hno01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LT974_13360 (truA)
Transfer RNA biogenesis [BR:
hno03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LT974_13360 (truA)
Prokaryotic type
LT974_13360 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UHH24960
LinkDB
All DBs
Position
complement(2488938..2489732)
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AA seq
264 aa
AA seq
DB search
MPRRAFRVAYDGRPYYGFQRQPDVTTVEGELFGALRRLGVFEGEKPPGYAAAGRTDAGVS
ARAQTIAFDAPTWLTPSGLNSELSGPLRTWATADAPADFHATHDANWREYRYFWLAGDED
DKRARRALDRLLGEHDFHNLTPDDTNTVREVSGGIEREGDFLVVRLRASGFCRELVRRVV
ALVQAVAGGGDFDRIDRLLAAEPIEGPEGVPPAPAGPLVLHDVDYDLDFDAEPPAAAATR
EMFADLREERRARARVAGHVADSL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtcgcgcgttccgcgtcgcctacgacggccgcccctactacgggttccagcgc
cagcccgacgtcacgaccgtcgagggcgaactgttcggcgcgctccgacgcctaggcgtc
ttcgagggcgagaaaccaccgggctacgccgccgccggccgcacggatgccggcgtgtcg
gcgcgcgcgcagaccatcgcattcgacgcacccacgtggctgacgccgtccgggctgaac
agtgaactctccgggccgctccgcacgtgggcgactgccgacgcgcccgcggactttcat
gcgactcacgacgcgaattggcgggagtatcggtacttctggctcgctggagacgaggac
gacaagcgagcgcgccgcgcgctcgaccggctgctcggcgagcacgacttccacaacctc
acccccgacgacacgaacaccgtccgcgaagtgtcgggtggcatcgagcgtgaaggcgac
tttttggtggtgaggctgcgcgcgagcggattctgccgcgaactcgtgcgccgcgtcgtc
gcgctcgtgcaggcggtcgcaggcggcggcgacttcgaccgcatcgaccggctgctcgcc
gccgaaccaatcgagggacccgagggcgtaccgcccgcgccggcggggccgttggtgctc
cacgatgtcgactacgacctcgacttcgacgccgagccgcccgctgcagccgcgactcgg
gagatgttcgcggacctgcgcgaggaacgccgtgcgagagcgcgcgtcgccggtcacgtc
gccgactccctgtga
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