Halobacterium noricense: LT974_16360
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Entry
LT974_16360 CDS
T07823
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hno
Halobacterium noricense
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hno03400
]
LT974_16360
Enzymes [BR:
hno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LT974_16360
DNA repair and recombination proteins [BR:
hno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LT974_16360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UHH27214
LinkDB
All DBs
Position
unnamed1:165589..169068
Genome browser
AA seq
1159 aa
AA seq
DB search
MPSDEPIRLRNAQRTIRDAYFQHESGLFTLNCVPGAGKSEVSDHIGAEDILRRYVAGDPT
PEQRVAVISFNRSEAENLIPDICTRLRELVEHDLIPAANDVSDEELEYLIQRIRHAPFVG
TIDGVLRDVLSDIAPDIGFEEMPTVGNPARQKQLHTTCYRRIQEDSDIVQRLARLEAAYP
AGEHGDDMTEMLETAVRYCRNRRLSTDEFRTGLEQTVDDTYPDGAPDSFGDIITAIERYV
GADVDKNAYDDIGDEELDAICDADARLYDAWRARVDDFCAVLETYRRTYRHAIRDEEVVS
HTDVAYLVDAYFAGRLDDIDDAQRSRIQQRYHTRIRSLIIDEAQDVSAIQHAALSHLVTS
NTRVFCAGDLLQSIYRWRHADPTLFETAADEGEYLGVDWDIHEHRTATTTYRCVPDIASA
INEISEATLTDPARGNLGDVNVRYPGLEASRDSTTGSSIHIAAFDPIPAHPDSTTWVNPD
EESGEAAKLATLIANGLADGTFTDDNDAPLGITVLFRWSAKMDEYEDAFDEEDVSVRTAS
ENLFECPVVNTVLDVCEWLVEPADPEQTRQLVTESSLGLESLKPAFETHCWSLDAVLSDC
ELTDAHQDILNSLIELRNRRERFFSQPAGTYVEDIIKALALRADPHERFDITPAQRVANL
DALVDTLQEWETDDHIDLRELSELIDPFRQQAHLGPNQPSTADTSHDVEFRTIHDAKGDQ
DDVIVVANPGFDLWKHGPQAQRFISQGSINALRPPTNTDTPEDVSLPPFTNGLYEPENQW
DRDVGLRWTTSHWCNNIEDAADPTSLLGPDRLVRAAANKRAEAWRLLYVALTRAQDHLVV
PLPRSRPYEPRPRDRWLDTIRDALNFTGDQTGTYTVDTEPHSFDVGVNDVALDATWRNTS
RSRDDDVAVNPPCRADLAPWVPRFVNPSTMYPLTEAPDTHVLNHLLGNALHTDANDVPDH
VPLRFDTLGPDDIGSCLHKVLTTLVDRDVPEPTLRNAGDEVRHVFDDILNDHAKRIGDDE
RDELFTFFEEEVLDDFLASDLWARIQRAERVTVERPIDGLVTNNDVEIEVHGTSDFVVES
PSGEQHVSDVKITLTKPTAETQRRYKLQVTAYSYLFEQQEHSTTPVDGTVETFGVARDTI
DPSWPADIVERRLTALIRQ
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtgacgagccgattcgactgcggaacgcacaacgaaccattcgtgatgcgtac
ttccaacatgagtctggattgttcacgctcaactgcgttccgggcgcagggaagtctgag
gtctccgaccacatcggtgcagaggacatccttcgtcggtatgtcgcgggggatccaaca
cccgagcagcgagtcgcagtcatctcattcaaccgcagcgaggcggagaatctcatcccg
gacatctgtacccggcttcgagaactcgtcgaacacgatctgatccccgccgcgaacgat
gtatctgacgaggaactggaatacctgattcagcgaatcagacacgctcctttcgtcgga
acgattgacggtgtccttcgggacgtgctgagtgatatcgctcccgacatcggtttcgag
gagatgccaaccgtcggaaaccccgctcgacagaaacagctgcataccacctgttaccgc
cgtattcaggaggactccgacatcgtacagcgactggcgcggctggaggctgcgtacccc
gctggtgagcacggtgacgacatgaccgagatgcttgagactgcggtcaggtactgccga
aaccgccgactctcaaccgatgagttccggactggtctcgaacagaccgttgacgacacc
tacccggacggcgctccagactcgttcggtgacatcatcaccgcaatcgaacgctatgtc
ggcgcagacgttgacaagaatgcctacgacgatattggcgatgaggagctcgacgcgatc
tgtgacgcagatgcgcgtctctacgacgcctggcgtgctagagtcgacgacttctgcgcg
gtccttgagacgtaccggcgaacgtaccggcatgccatccgtgacgaggaggttgtgtca
cacacggatgttgcgtacctcgtcgacgcgtactttgctggccgactcgatgacattgat
gacgctcagcgatcccgcatccaacagcggtatcacacgcggattcggagcctgattatc
gacgaagcgcaggacgtctctgcgatccagcacgcggcactctcgcacctagtgacatcc
aatacgcgggtgttttgcgctggagatctcctccagagcatctaccgctggcggcacgct
gacccaactctcttcgagaccgcggcagacgaaggcgagtatttaggagttgattgggat
attcacgagcatcggactgcgacaacaacgtaccgatgtgttccggacatcgctagtgcg
atcaacgaaatctccgaggcgacactcacagatcctgcccgtggaaacctcggcgacgta
aatgtccgatatccggggctcgaagcgagtcgggactcaacgactggttcgagtattcat
atcgcggccttcgacccaattccggcacatcctgattcaactacctgggtcaatcctgac
gaggagagcggggaagcggcgaagctggcaacgcttattgccaatgggctcgcagacgga
acgttcactgacgacaacgatgcccctctcggaatcaccgtgttgttccggtggtcggcg
aaaatggacgagtacgaggacgcgtttgacgaggaagatgtgagcgtgcggacagcgagt
gagaacctcttcgaatgtccggtcgtgaatacggtactcgatgtgtgtgaatggttagtc
gagccggctgaccctgaacagactcgccagcttgtcacggagtcgagtctcggacttgag
tcgctcaaacctgccttcgaaacacattgttggagccttgatgcggtgctcagcgactgc
gaactcacggacgcccaccaagacatccttaacagtctcatcgagctccgcaaccggcgt
gaacggttcttctcgcagcctgctggaacatacgtcgaggacatcatcaaggcgcttgct
ctccgggcagacccccacgaacgcttcgacatcaccccggcacagcgagtcgccaacctc
gatgcactcgttgataccctccaagagtgggaaacggacgaccacatagacctacgcgaa
ctttccgagctgatcgacccgttccgccaacaggcccacttgggcccgaaccagccaagc
accgctgacacaagccacgatgtggaatttcggacaatccacgacgcaaaaggcgaccaa
gacgacgtcatagtcgtagcgaatcctggcttcgacctctggaagcacgggccacaagcg
caacgcttcatttctcaaggcagtatcaacgccctcaggccaccaacaaacaccgacacc
cccgaagacgtgtcgctcccaccgttcaccaacggactgtacgagccagaaaaccagtgg
gaccgcgacgtcggattacgatggacgacaagtcactggtgtaataatatcgaggacgct
gcagacccgacatcgttgctcggtcccgaccgactcgtccgagcggcggcgaacaagcga
gcagaagcatggcgactgctgtacgtcgctctcacacgggcacaagaccacctcgttgtc
ccactcccacggtcacgcccctatgaaccacggccacgtgaccggtggctcgacacgatt
cgagacgccctcaacttcaccggcgatcagacagggacgtacacggttgatacagaaccg
cattccttcgacgtcggcgtcaacgacgtcgccctggatgcaacatggcggaatacgtcc
cgttcccgggatgacgacgtcgccgtgaaccccccgtgccgcgcggatctcgctccctgg
gtgccacggttcgtcaacccgagtacgatgtacccactcaccgaagcccccgacacacac
gtactcaaccacctcctcgggaacgccctacatacagacgcgaacgacgttccggaccac
gtccccctccggttcgacaccctcggcccagacgacatcggctcctgcttacacaaggta
ctgaccacactcgtcgaccgtgacgtaccggaacccacactccgcaacgccggcgacgag
gttcgacacgtgttcgacgacatcctgaacgaccatgctaaacggatcggcgacgatgaa
cgcgacgaactgttcaccttcttcgaagaggaggtactggacgacttcctcgcgtcagat
ctatgggcgcgaatccagcgggccgagcgagttaccgtggagagaccaatcgatggcctc
gtgacgaacaacgacgttgagattgaggtccacggaacgagcgatttcgtcgtcgagtca
ccctcaggcgagcagcatgtgtccgacgtgaagatcacactgacgaagccaacggcagag
acccaacggcggtacaaacttcaagtaacggcctactcgtacctgtttgagcagcaagaa
cactcgacaacccccgtagacgggacagtggaaaccttcggagttgcgcgtgacacgatc
gacccatcttggccggctgatattgtcgaacggagacttacagctctcattcgacagtag
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