Halobacterium noricense: LT974_17115
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Entry
LT974_17115 CDS
T07823
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hno
Halobacterium noricense
Pathway
hno03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LT974_17115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hno03021
]
LT974_17115
Transcription machinery [BR:
hno03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
LT974_17115
Prokaryotic type
Archaeal type
TFB
LT974_17115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
DUF7560
VG15
Zn_Ribbon_YjdM
DUF8054_C
Zn_ribbon_IS1595
IBR_1
DUF8122
Zn_Tnp_IS91
Cas12f1-like_TNB
DUF8106
zf_Rg
DZR_2
DZR
Zn_ribbon_LysW
Zn_ribbon_PADR1
Motif
Other DBs
NCBI-ProteinID:
UHH27002
LinkDB
All DBs
Position
unnamed1:304220..305149
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AA seq
309 aa
AA seq
DB search
MTKSPQNQGTGERLVCPECGGQIRYNDSQREAACQSCGLVTDEQMIDHGPEWRSFTDEQR
QNKSRVGAPTTPLMHDKGLSTTISWQDKDARGQYLSSRKRERLQRLRRWDERFRTKDASE
RNLKQAFDEIDRMASALGLPEAVRETAGILYRRAVEEGLLPGRSIEGMATAALYASARQH
QTPRSPFVVETVSRVEKKRFQRAYRYLSRELSLEIEPESPDQHLPRLASSLDVTDEALRR
ARELLSVAQRNAVHSGKSPVGMAASALYAATYLTNEKLTQETVSSAAGVSKVTIRTRYQE
LLDVYAEHK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcaccgcaaaatcagggcacgggggaacgattagtctgcccggagtgtggt
ggacagattcgttataatgattcgcagagagaggcggcgtgtcaaagctgtggcctagtc
accgacgaacagatgatcgaccatggtccagagtggcggtcgtttactgacgaacaacga
cagaataagagtcgggtcggggcaccgacgacgccgttgatgcatgataagggcctcagc
acgactatcagttggcaagacaaagacgcacgcggacaatatctgtccagtcgcaaacga
gagcgactgcaacgtctacgccggtgggacgaacgattccgcacgaaggatgcctctgag
cggaatctcaaacaggcattcgacgaaattgatcgaatggcatcggctctcggcttgcct
gaggcagttcgtgagacggcgggtattctctaccggcgtgccgtcgaggaagggctactt
ccgggccgttctatcgaaggtatggcaaccgctgcactgtacgcgagcgcgcgacagcac
caaactccgcgatcccctttcgtcgtcgaaacggtaagtcgagttgaaaagaaacggttt
cagcgagcataccgctacctctcccgggagcttagccttgaaatcgaaccggaatccccg
gatcaacatctgccgcgactcgcgtcgtcgcttgacgtgaccgacgaggcactccgacgt
gcgcgagaactgctcagcgttgcccaacgcaacgccgtccacagtgggaaaagcccagta
ggcatggcggcatccgcgctgtacgcagcaacgtatcttacaaacgaaaaactcacccaa
gagactgtgagttcagcggcaggcgtgagcaaggtcacgattcgaactcgctaccaagaa
cttctcgatgtctacgccgagcacaagtaa
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