Halobacterium noricense: LT974_17415
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Entry
LT974_17415 CDS
T07823
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hno
Halobacterium noricense
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hno03400
]
LT974_17415
Enzymes [BR:
hno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LT974_17415
DNA repair and recombination proteins [BR:
hno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LT974_17415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UHH27060
LinkDB
All DBs
Position
unnamed1:361644..364700
Genome browser
AA seq
1018 aa
AA seq
DB search
MVEDNWAVSHEPLRLRAETLDAVVREWYEHLHGPIQPLAGQLNRRLAEYALDKSTAETDG
ALAGEPASAALADSFSSRFSLFDDAGVGTADALVAEFEGSALDDRIAKATVDAYRHYRNL
HADYVDEWVCTRGEMFDAVATAEQSLSELSPELDVVVLSGYHEFRPVERRLIERLADELP
MIALLPLHQDGRSGVDAVAEDALDVYEALDFEAVELEPVDESGRAFGTITESLYRPDPGT
APVPDALRWRELPTPEREIRFVARELRTELANGRDPDDLAVVVPGTEAYSGYVEDTFDTF
DIPHVTTAASQLNRTFTGSVVHDLLNLAEPDPRAEDLTSLLSNPLVDVVDTGQANAVTAA
ARRRDTVSVSPLLDDVDGEAAALIEELLATLETLRTGEIVDATETLRPLLDERFDLEGAT
EDYASGAEQAVEQRAYDLVDEVLSSFESLAAVNSDLSPLALFTRAFDGVPIRVPQRAAGG
HVEVMGLLDARMRSFEKVFLVGLTSEHFPVTPERPAFFEEMTDAHPRFDTGDERLRGRYL
FATLLANVDELTITTPETGDDESAVVRSPVLDELQRVTGIEPEDGVDDRVGSREDLQRHV
AATADRRAAVSLAGDRGDLSPKQTKRTDRGLHCADNRGTAGLSEHDGVLEPGTVDEVYPL
SEREPYSASRIERYVECGFKFYADEVLGIEDPDDVEVVPTPLETGSYVHDVLERFFADLQ
DETEDGFDLTEFNWDDLATHLREIAVDELREADFEYDGLFYERWKAELFAGLGDGVSAPY
EAGSKPHDAPEQGLFATFLDNELSRDGAGRPHLFEAPFGEGLPDSDAGPFTVERPDGSTV
SIRGYIDRVDVNRDGEQPTLTLYDYKTGRAPYMTKTTGGTKFQLPIYLLAAAEVVDGDLF
EQGSLSATYYQVRPPNDLKVPRGVESKFDSEAELRRFLNDVVPEWLGQIDEAIGNGRFHT
TLLSARGANCRYCDYRRACDVRHHRKRQFVDEVHEDDAAYVPLRVRDDEDIEAVMSDD
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaggacaactgggccgtttcccacgaacctctccgtcttcgtgccgagacgctt
gacgcggtcgttcgggagtggtacgagcatctccacggtccgattcaacccctcgccggg
cagctgaaccgccggctggcggagtacgctctggacaaatcgacagccgagacagatggc
gctctcgccggcgaacctgcctctgccgctctcgctgattcgttcagtagccgcttctcg
ctcttcgacgacgccggcgtcggtaccgctgacgcgctcgtagcggagttcgagggttca
gccctcgatgaccgtattgcgaaagccactgtcgacgcgtaccgacactaccggaatctc
cacgctgactacgtcgacgagtgggtctgtacccggggagaaatgttcgacgccgtcgcg
acggcggagcagtcactatcggagctctccccggaactggatgtcgtcgttctctccggg
tatcacgagttccgtcccgtcgaacgccgcctcatcgaacgcctcgccgacgaacttccg
atgatcgcactgctgccactccaccaggatggccggagcggagtcgacgccgttgcggag
gacgccttggatgtctacgaagcacttgactttgaggcagtagaactcgagcccgtcgac
gagtcagggcgggcctttggaacgatcaccgagtcgctctaccgcccggaccccggtacc
gcccctgttccagacgcactccggtggcgggaactcccgacgcccgagcgcgagattcga
ttcgtcgctcgcgagctccgaactgagttggccaatggtcgcgatcccgacgacctggct
gtcgtcgtcccggggaccgaggcctattcggggtacgtcgaggacacgttcgatacgttc
gacatcccgcacgtcacgaccgccgcctcacagctgaaccggacgttcaccgggagcgtt
gtacacgacctcctgaacctcgccgaaccggatccgcgggccgaggacctcacatcgctg
ctttcgaatccactggtcgacgtcgtcgacaccggccaagccaacgccgtcacggcagct
gctcgccggcgtgacacggtttctgtgtcacccctgctcgatgacgtcgacggcgaggcg
gcggcgctgatcgaggagctgctggccacgctggagacgctccggacaggtgagatcgtg
gatgcgaccgagacgctccgaccactgttggacgaacggttcgacctggagggggcgacg
gaggactacgccagcggcgccgagcaagccgtcgaacagcgagcctacgacctcgtagac
gaggtcctctcctcgttcgagtcgctggcggcggtcaatagcgatctctccccgttggca
ctgttcacccgtgcgttcgatggtgttccgatccgggttccgcagcgcgctgctggcggt
cacgtcgaagtgatggggttgctcgacgcccggatgcgctcgttcgagaaggtgtttctc
gtgggactgacgagcgagcacttcccggtgacgccggaacgcccggccttcttcgaggag
atgaccgacgcccatccgcgattcgacaccggcgacgaacgactccgtggccgctatctc
ttcgcgacgctgctcgcgaatgtcgacgaacttacgatcaccacaccagagacgggcgac
gacgagtccgccgtcgtccggtcgccggtcctcgacgaactccagcgcgtgaccggcatc
gaacccgaagacggcgtcgacgaccgcgtgggctctcgcgaagatctccagcgccacgtc
gctgcaacggccgaccggcgtgcggcagtaagcctcgccggcgaccgaggtgacctctca
cccaagcagaccaagcgcacggatcggggactccactgtgcggacaacaggggaacggct
ggcctctccgaacacgacggggtgttagaacctgggacagtcgatgaggtataccctctg
tcggagcgggaaccctacagcgcgagtcgaatcgagcgctacgtcgagtgtgggttcaag
ttctacgctgacgaagtgctcggaatcgaggatcccgacgacgttgaggtcgtccctacg
cccctcgaaaccggatcgtacgttcacgacgttctcgaacgatttttcgcggatctgcag
gacgagaccgaggatggtttcgatctcacggagtttaactgggacgacctggcgacgcac
cttcgcgagatcgccgttgacgaactccgggaggctgacttcgagtacgacggcctgttc
tacgaacggtggaaggcggagctgttcgcgggtctgggtgacggcgtgagcgctccgtac
gaggctgggagcaaacctcacgacgcaccggaacaggggttgttcgctacgttcctcgac
aacgagctctcgcgggacggcgccggccgcccacacctgttcgaagccccattcggcgag
ggacttcccgactcggatgctgggccgttcacagttgagcgaccggacggctcgactgtc
tcgattcggggttacatcgaccgcgttgacgtgaaccgggatggagaacaaccgacgctc
acgctctacgactacaagactggtcgagcaccgtatatgacgaagacgaccggcggcacg
aagttccaactccccatctatctgctcgctgccgccgaggtcgtcgacggtgacctgttc
gagcagggatcgctttcagcgacgtactatcaggttcgaccgccaaacgacctcaaggtt
ccacgcggcgtcgaatcgaagttcgattcagaggccgaactccgccggttcctgaacgat
gtcgttccggagtggttaggccagatcgacgaggcgatcggcaacggtcggttccacacg
accctcctgtccgctcggggtgcgaactgccgatactgtgactaccgtcgggcgtgcgat
gtccgccatcaccgcaagcggcagttcgtcgacgaggtccacgaggacgacgccgcgtac
gttccgctccgtgttcgcgacgacgaggacatcgaggcggtgatgagtgatgactga
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