Halobacterium noricense: LT974_17420
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Entry
LT974_17420 CDS
T07823
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hno
Halobacterium noricense
Brite
KEGG Orthology (KO) [BR:
hno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hno03400
]
LT974_17420
Enzymes [BR:
hno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LT974_17420
DNA repair and recombination proteins [BR:
hno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LT974_17420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DUF2800
AAA_16
TED_complement
Motif
Other DBs
NCBI-ProteinID:
UHH27061
LinkDB
All DBs
Position
unnamed1:364693..368328
Genome browser
AA seq
1211 aa
AA seq
DB search
MTEDPEEIQLTEEQEDALVQGRNVAITAGAGTGKTTTLTERYVTILAENPSLTPENIVTI
TFTRKAAAELTERVREEVYDRLEAVDSPKAYHRWRNVLDDLEDGYVHTIHAFCTRLLRER
AVEAPVPLGFDVLDEDGAATLQREVVTEFLERNQDDDDVALLAQLWGHDQLVDVLAGLLD
ERPQSEAVLEEWRDAEVNDYVDICWEVVCDLDVADARQTLYADGLLEQLRTVAGRVDREG
AIADEDGLRVYRTFTEVATTLSADPEESDPRDCQRAILDLYEACEKKNGGLYSSSGYVVG
DRDDWGEYGDVYDDLKDAIDTVIDAVEPHADAVETTPGELEANSAHYALALIRVFDDVLA
TYTDEKERRDTLDFPDVIETTLEFLRANDAVTERLREQFAAVMVDEFQDTDPRQWELVKL
LTGVDEQAASNVFLVGDEKQSIYGFRGADVTTFGDARRELQTVNEARGVDDVPDSDAESP
TALELSGNFRTLDEPLSFLNELFEYLFQPEGDSHEPHEAPPQELTTQRDRIEDIGGLSGS
VEYLAVPDDADTAAELFGDDHPVAEGALDHTIEAEAQALAARLTHLFDDPPQVQDPDTGA
HRDATPDDTAILLRRRTHLDRYQRALEEYDIPYTVVGGVGFYDTPEVQALTNLLRVLGDP
QDDVSLYGVLRSPLFGFADDRLAPAVAEADSVWDGLAEADDPHLADAFDLLTTWRTLSGC
ATPSEDGVLPWNRLLSRVIDDTGYLASVSADERGRQAVANVEKFRDQVRTWSENGVHTAA
GLLHRIDRQAEIDPREGEADIPGDAEGVRIMTIHSAKGLEFPIVTVPDLGSDLNFGRSVD
DHGYVRLVDGTDDAPPVPAVGGPNPGDAFSIEKTAVHEYADRRSRPQERAESKRLLYVAC
TRMRDHLLLCGTHDIDVDESDTIELGEPAAFDDADRWRDWLQPALLDGALVAEAVRDGQA
RCEIDGASYTVRRPPRPVDWDTDDDAVDSAPEISIPSPPSLAPAKRIAATTLVNAVADAS
PDGHSYSQREESAGLSPTTFGTVVHRINELRPPRDEWTTLIRRLSQMAGEEPTESDLRDA
VNHAADAVEFVDHIESDTQPQEVYDEYSVVARIDESRIVGDIDRLLVTPDAFHIIDYKTN
ELSATTSDELAEHYRPQMLAYALALLQHDRNRDVRSSLRFTDEGIEERFHWVSDQMTEME
SELRSMVDLVD
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggatcccgaggagattcagctcacagaggaacaggaggacgcgctcgtccaa
ggccggaacgtcgcgatcactgccggcgctgggacggggaaaacgacaacgctcaccgag
cggtacgtgacgatactggccgagaacccgtcactcacgccggagaacattgtcacgatc
accttcacgcgaaaggccgctgccgaactgaccgagcgcgttcgggaggaggtgtacgac
cggctcgaggctgtcgactcaccaaaggcctaccaccgctggcgaaacgtcctcgacgac
ctggaggatggctacgtccacaccattcacgcgttctgtacgcggctcttgcgagaacgg
gccgtcgaggctccggtcccgctcggcttcgacgtgcttgacgaagacggcgccgcgaca
ctccaacgcgaagtcgtgacggagttcctcgaacgtaaccaggacgatgatgacgtcgcg
ctcctcgcgcagctctggggtcatgaccagctggtcgatgtactcgctggattactcgat
gagcgcccacagagcgaggcggtcctcgaggagtggcgtgatgcggaggtcaacgactac
gtcgatatctgctgggaggtcgtttgtgatctcgacgtcgccgacgcccgacagacgctg
tatgcggacggactccttgagcagctacgcacggttgcgggccgtgtcgaccgcgagggc
gctatcgccgacgaagacggtcttcgagtctaccggaccttcaccgaagtcgcgaccaca
ctctcggccgacccggaggaaagcgatcctcgcgactgtcaacgggcaatcctcgacctc
tacgaggcctgtgagaagaagaacggtggcctgtacagcagttcggggtacgtcgtcggt
gatcgggacgattggggtgagtacggtgacgtctacgacgatctgaaagacgccatcgac
acggtcatcgatgccgtcgaaccgcacgcggatgcggtcgagacgacacccggtgagctt
gaagcaaacagcgcccattacgcgctggctctgatacgggtcttcgacgacgtcctcgca
acctacaccgacgagaaggagcgccgcgatacgctcgacttccccgacgtgatcgagaca
acgcttgagttcctgcgagcgaacgatgccgtcacggagcggctccgagagcagtttgcg
gccgtgatggtcgacgagtttcaggacacggacccgcgtcagtgggagttggtcaagctc
ctcacgggcgttgacgagcaggcggcgtcgaacgtcttcctggtcggcgacgagaaacag
agcatctacggattccgtggggccgacgtgacgacgttcggggatgcgcgcagagaactc
cagaccgtcaacgaggctcgtggggttgacgacgttcccgacagcgatgccgagagtccg
accgccctcgaactctccgggaacttccggacgctggatgagccgctgtcgttcctgaac
gagctcttcgagtacctgttccagccggagggtgacagccacgagccccacgaagcgcca
ccgcaggagttgaccacacaacgcgaccgtatcgaggacatcgggggactgtccgggagt
gtcgagtatctcgctgtccccgacgacgctgacacggcggcagagctcttcggcgacgac
catccggtcgccgaaggtgcgctggaccacaccatcgaggccgaggcgcaagcgctcgct
gctcgactgacccacctgttcgatgatccgccgcaagtccaagaccccgatacgggtgct
catcgcgacgctacgccggacgacacggcaatcctcctccgccggcgaacccatttggat
cggtatcagcgcgctctcgaggagtacgacatcccctacactgtcgtcggtggcgtcggg
ttctacgatacgcctgaggtccaggcgctcacgaacctgcttcgagtactcggtgatcca
caggacgacgtctctctctacggggtgcttcggtcgccgctgttcggattcgcggatgat
cgcctcgcaccggctgtcgcagaagctgattcagtatgggatgggctcgccgaggcggac
gatccacacctcgcggacgcgttcgacctccttacgacgtggcggaccctcagcggctgt
gcgacgccgtccgaagatggcgtcctcccgtggaaccgcctgctgtcccgagtgatcgat
gacacggggtatctggcgagtgtgagtgctgatgaacgcggtcgacaggccgtcgcgaac
gtcgagaagttccgcgaccaggtccgtacctggagcgagaacggtgttcacacagctgcc
gggttgctccaccggatcgaccgccaagccgagatcgaccctcgtgagggggaggcagat
attcccggtgacgccgagggcgtccggattatgacgatccattctgcgaagggactcgag
ttcccgatcgtcaccgtccccgatctcgggagtgacctcaacttcggtcgctccgtcgac
gaccatggctacgttcgacttgtggacggaactgatgacgcgccgccggtcccggcggtc
ggcgggccgaatccgggcgatgcgttctccatcgagaagacggccgtccacgagtacgcc
gaccgacggtcgcgtccacaggagcgggcggagtcgaaacgcctcctctacgtagcgtgt
acacgaatgcgggatcacctccttctctgcggcacgcacgacattgacgtcgacgagtcc
gatacaatcgaactcggcgagcctgcagccttcgacgacgcagaccggtggcgcgactgg
ttacagccagccctcctcgacggagcactcgtcgccgaggcggttcgtgacggacaggcc
cgttgtgagatagatggagccagctatactgttcgcaggccgccgcgcccagtagactgg
gacaccgacgacgatgctgttgattcagcgccggagatatcgatcccctcaccgccgtcg
ttagcgccggcgaaacggatcgcggcgacgactctcgtgaatgcggtggcggatgcgtct
ccagacggtcacagttactctcagcgtgaggagtcggccggcctgagtccaacgacgttt
gggacggtcgtccaccggatcaacgaacttcgtccaccgagagacgagtggaccaccctg
atccgtcgtttgagtcagatggctggtgaggagccgacagaatcggacctccgtgatgct
gtcaaccacgctgctgatgcagtcgaatttgttgatcacatcgagtctgatactcagcct
caggaggtttacgacgagtactctgttgtcgctcgaatcgatgagtcgcggattgtcggt
gatatcgaccggctgctcgtcacgccagacgcattccacataatcgactacaagaccaac
gagctctcagctacgacatcggatgagctcgcggaacactatcgaccgcagatgctcgcg
tacgctctcgctctcctccaacatgaccggaatcgtgacgtacgatcttcactccggttt
actgacgaggggatagaggagcggttccattgggtgtcggatcagatgacggagatggaa
tctgaactacgctcaatggtggatttggtggattaa
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