Vreelandella neptunia: SR894_01485
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Entry
SR894_01485 CDS
T09634
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hnp
Vreelandella neptunia
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hnp03016
]
SR894_01485 (truB)
Enzymes [BR:
hnp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SR894_01485 (truB)
Transfer RNA biogenesis [BR:
hnp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SR894_01485 (truB)
Prokaryotic type
SR894_01485 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WQH13231
UniProt:
A0ABZ0YM73
LinkDB
All DBs
Position
301192..302112
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AA seq
306 aa
AA seq
DB search
MARQRRGLPVNGVLLLDKPKGVSSNHALQRVRRLFQAQKAGHTGTLDPMATGLLPICLGE
ATKFSSHLLEADKVYRTRVELGVITDTGDAEGTIIEQHEVPSLSADDVEAVLTRFRGEID
QVPPMYSALKHQGKKLYELAREGKQVERAARRVSVYDARLLSFEGTAFELEVSCSKGTYI
RTLAEDIGQALGCGAHISQLRRLKTGPFLADAMWTLEALEALADQAALEAELMPVDVLVD
HLPLLTVDDTAHSRLAHGQPAALETGALAPDEVARLYYAETFIGLGVVKGAQEVAPKRLL
STVAIS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgtcaacgtcgcggtttgccggttaatggcgtactactgctggataagcccaag
ggcgtttccagcaaccatgcgctgcagcgtgtgcgtcggttgttccaggctcaaaaagcc
gggcacaccggcacgctagacccgatggcaaccgggttattgccgatttgtctaggcgag
gcgaccaagttttcatcgcacttgctggaagccgacaaggtgtatcgcacccgggtagag
ctaggggtgatcaccgataccggcgatgcagaaggcacgattattgagcagcatgaggtt
cccagcctaagcgccgatgacgtggaagctgtgctcacccgttttcgcggtgagattgac
caagtgccgcccatgtattctgccctcaagcatcagggcaaaaaactttacgagttggcc
cgtgaaggcaagcaggtagagcgtgcagcccggcgcgtaagcgtgtatgatgcgcgcctg
ctatcgtttgaaggcactgcttttgaactggaagtaagctgcagtaaaggcacttacatc
cgcacgttagccgaagatattggccaagcgcttggctgtggtgcacacatcagtcaacta
agaaggctcaaaacgggaccttttttagccgacgcgatgtggacgctagaggccttggaa
gcattggccgaccaagcggcactggaagctgagctgatgcccgtggatgtgttggtggat
catttaccgttactgacggtagacgacaccgcccattctcgtttggcccatggccagccc
gctgctctcgaaaccggcgcattagccccggacgaagtagcccgactttattacgccgag
acgtttatcggccttggcgtagtgaaaggtgctcaggaagtggcgcctaagcgactgtta
agtaccgtcgctatctcgtaa
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