Vreelandella neptunia: SR894_04565
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Entry
SR894_04565 CDS
T09634
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hnp
Vreelandella neptunia
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hnp01002
]
SR894_04565
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hnp01011
]
SR894_04565
Peptidases and inhibitors [BR:
hnp01002
]
Cysteine peptidases
Family C82
SR894_04565
Peptidoglycan biosynthesis and degradation proteins [BR:
hnp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SR894_04565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
GMC_oxred_C
Motif
Other DBs
NCBI-ProteinID:
WQH13821
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Position
999614..1001248
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AA seq
544 aa
AA seq
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MNEIQPLRQWAIGVALCLTLTHSPLGISHAYADSAPLQQALNQQVSAVEAHPLPIAEFYQ
LRDGQPAWQAVRAVESLVAALNSLETDGLTPEDYHADRLLDEFQRSQASSESAQAAFDIK
ATRSLLLALDHLERGKVNPRDVEPQWDAPRPERSYSLMRVVHAVDDYALDNAIALARPSS
AAYQQLRDALKQHYQLVNLGSVPYLDARDESLRPGDEDDDVSVLRQRLALWGEADLQVAD
SSAYPMIGVQAASNRRIFDAPLEAAVRRFQRRHLLQEDGVVGEQTRLALNTSVASRIDQL
RVNLERARWIRPMQSSEPRVWVDIAGYRMHYVRPNGQHWDARVVVGTPRRETPIIHSTIS
HLTINPSWTIPPTIMREDVLPQVRADIDYLARKNIQVISPMGEPLAAEEIDWQRPGGVML
RQVAGAGNPLGRVVVRFPNDDMIYLHDTPARGLFRRDQRALSSGCIRVEGVAELAQMLLQ
DTGSRYQMSSLLNGGSDRNVNLSQRIPIALHYLTAWPNAEGEVEFRPDIYRRDAALLAAL
QRPV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagatacagccactaagacaatgggcgataggggtcgctctatgtctcacgctt
acccacagccctttaggcattagccatgcgtatgcggattcagcgccattgcaacaggcg
ctgaatcaacaagtaagcgcggtggaagcgcacccgttgcccattgctgaattttaccaa
ctgcgcgatggtcagcccgcttggcaggcagtcagggcggtggaatcactggttgccgca
ctcaacagcttggaaaccgacggtttaacgcctgaggattaccatgctgacaggctgctt
gatgagtttcagcgcagtcaggcaagcagtgaatccgcccaggcggcgtttgatattaaa
gcgacgcggtcgctactgctggcgctggatcatctagagcgcggcaaggtgaacccgcga
gatgtcgagccccagtgggatgcgccacgccctgaacgtagctactctctgatgcgcgtt
gtgcatgccgtcgatgattatgcgcttgataacgctatcgcgctggcccggccttcatca
gcggcatatcaacagttgcgcgacgctttgaagcagcattatcaactggttaacttgggg
agcgtgccctacttggacgcgcgggatgagtcgcttcggcctggggatgaagacgacgat
gtgagcgtgctgcgtcaacggttagcgctgtggggtgaggctgatttacaggtagctgac
agcagtgcttatcccatgattggggtacaggcggcgtctaatcggcgcatctttgacgca
ccgctggaagccgctgtgagacgttttcagcgccgtcatctgctacaggaggatggtgtg
gtaggcgaacaaactcgcctggcgttgaacacctcggtggcgtcgcgaatcgatcagctg
cgggtcaatttagaacgcgcgcggtggatccgtccgatgcagtcttccgagccacgggta
tgggttgatattgcaggctaccggatgcactacgtgcgtcctaacggacagcactgggat
gcccgtgtagtggtaggaacgccgcgtcgtgagacgccgattatccattccacgatcagc
catttaaccattaatccttcctggacaatcccaccgacgattatgcgcgaggatgtattg
ccccaggtgcgtgccgatatcgactacttggcgcgtaaaaatatccaggtgattagtccc
atgggcgaaccgctcgctgcagaggagatcgactggcagcgccctggcggcgttatgttg
cgccaagtggcgggtgcgggtaatccgctaggtcgcgtcgtggtgcggtttcccaacgat
gacatgatctatttgcacgacacccctgcgcgtggcttgttccggcgcgatcagcgtgca
ctcagttcaggttgtattcgggttgaaggtgtggctgagctggcgcaaatgctgctgcaa
gataccggcagtcgttaccaaatgagttcgctgttaaatggggggagtgatcgtaatgtg
aacttatcccagcgtatacccattgcactgcattacttaaccgcgtggccgaatgcggaa
ggtgaagtggagtttaggcctgatatctaccgccgtgatgcagcgctactggccgccctg
cagcggccagtttag
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