Vreelandella neptunia: SR894_12320
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Entry
SR894_12320 CDS
T09634
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
hnp
Vreelandella neptunia
Pathway
hnp00071
Fatty acid degradation
hnp00280
Valine, leucine and isoleucine degradation
hnp00310
Lysine degradation
hnp00362
Benzoate degradation
hnp00380
Tryptophan metabolism
hnp00410
beta-Alanine metabolism
hnp00640
Propanoate metabolism
hnp00650
Butanoate metabolism
hnp00907
Pinene, camphor and geraniol degradation
hnp00930
Caprolactam degradation
hnp01100
Metabolic pathways
hnp01110
Biosynthesis of secondary metabolites
hnp01120
Microbial metabolism in diverse environments
hnp01200
Carbon metabolism
hnp01212
Fatty acid metabolism
Module
hnp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SR894_12320 (fadB)
00650 Butanoate metabolism
SR894_12320 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SR894_12320 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SR894_12320 (fadB)
00310 Lysine degradation
SR894_12320 (fadB)
00380 Tryptophan metabolism
SR894_12320 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SR894_12320 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SR894_12320 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SR894_12320 (fadB)
00930 Caprolactam degradation
SR894_12320 (fadB)
Enzymes [BR:
hnp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SR894_12320 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SR894_12320 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SR894_12320 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
SR894_12320 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WQH10953
UniProt:
A0ABZ0YGU3
LinkDB
All DBs
Position
complement(2639554..2641740)
Genome browser
AA seq
728 aa
AA seq
DB search
MIYQGNAITVTRRDTPNGNDIAMLTFDLKDESVNKLSSAVVAELGEAVKAIQAENSLKGL
LIASGKDVFIVGADITEFHSLFDKGEAYLEEMNLKVHDIFNAIEDLPFPTVTAINGLALG
GGCEVLLTTDFRVMSDKAKIGLPETKLGILPGWGGCVRLPRIIGADNAIEWIAGGTENRA
DAALKVGAVDAVVTAEQLEEAALDILDRANAGELDYQARRAEKTSPLKLNPIEQMMAFET
AKGYVAGKAGPHYPAPVEAIKVIQKGAGEERGRAQAIEAKAFAKLALSSVAFNLVGLFLN
DQVVKKKASKYEKQAQPVKQTAVLGAGIMGGGIAYQSASKGTPILMKDIKDDAIELGLKE
ARKLFAKQVERKKLTTEQMAEKLTNIRPTLSYGDFGNVDLVVEAVVENPKVKDAVLTEVE
GMVSENTILTSNTSTISINRLAQNLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAVA
ATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSFLVEQGADFQHVDKVMEKFGWPMG
PAYLLDVVGLDTAVHANEVMAEGFPDRMARDGKTAIQVMYDNDRLGQKNDKGFYAYEEDK
KGKPKKVTDEAAYALVKEVVKEHKEFSDEDIIARMMVPLCLETVRCLEDGIVATPAEADM
ALIYGIGFPPFRGGALRYIDAMGVAEFVKLAEGLAEELGPLYAPTDKLRQMAQNNEQFYS
SDNSATQA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaacgccatcacggtgacacgtcgtgacaccccgaatggtaatgat
atcgcaatgctcactttcgatctgaaagatgagtccgtcaacaagctttccagcgcggtg
gtcgcagagctgggcgaagcagtaaaagccatacaagctgaaaatagcttaaaaggctta
cttattgcgagcgggaaagacgtgtttatcgtgggcgccgatatcaccgagtttcacagt
ctatttgataaaggcgaagcctaccttgaggagatgaaccttaaggttcacgatattttt
aacgctattgaagatctgccgttccctacggtaacggcgatcaatggtctggcgctgggt
ggtggctgcgaagtattgctgaccaccgattttcgcgtgatgagcgacaaagccaagatc
ggcttgcccgaaaccaagctcggcatcctgcctggttggggtggctgcgtgcgtctaccg
cgcattatcggcgccgataatgccattgagtggattgccggtggcaccgaaaaccgtgcc
gatgccgcgctaaaagtgggtgccgtagatgcggtggtgacggctgaacagttggaagag
gccgcactggatattcttgaccgtgcgaatgccggtgagctggattaccaggcccgccgt
gctgaaaagaccagcccactgaagctcaacccgattgagcagatgatggcgtttgaaacg
gcgaaaggctatgtcgctggtaaggcggggccccattatccggcgccggttgaagcgatc
aaagtgatccaaaaaggcgcaggtgaagagcgtggccgtgcccaggccattgaagccaaa
gctttcgccaaactggcgctaagcagcgtagcgtttaacttggtgggtctgttcttgaac
gaccaagtggtcaagaaaaaagccagcaagtatgagaaacaggcgcagccggttaagcaa
acggccgtgctgggtgcgggtatcatgggcggtggtatcgcttatcagagtgcctctaaa
ggcacgccgattctgatgaaagatatcaaggatgatgccattgagctgggcctgaaagaa
gcccgtaagctatttgccaaacaggtggagcgcaaaaagctgaccaccgagcagatggcg
gagaagctgactaatattcgtccgacgctctcctacggagattttggcaatgtcgatctc
gttgtcgaagcggtggttgaaaaccccaaagtcaaagacgccgtactgaccgaagtggaa
gggatggtgagcgaaaataccattctcacctcgaacacatcgacgatttccatcaaccgc
ttggcgcaaaacctcaagcggccggaaaatttctgcggtatgcacttcttcaaccccgta
caccgcatgcctctggtagaagtcatccgtggtgagaagacctcggatgccgccgttgct
gccaccgtggcctacgctcgggcaatgggcaaaacgccgattgtggttaacgactgcccc
ggcttcttggtcaaccgggtactcttcccttactttggcggctttagcttcctggttgaa
cagggtgctgacttccagcacgtcgataaagtcatggagaagttcggctggcccatgggc
ccggcttacctgctggatgtggttggtctggatactgccgttcacgccaatgaagtcatg
gcggaaggcttcccagatcggatggcccgcgacggtaaaaccgctattcaggtcatgtat
gacaacgaccgtttaggccagaagaacgacaagggcttttacgcctacgaagaagacaag
aagggtaagccgaagaaagtcactgacgaagcggcttacgctttagttaaagaggtggtg
aaagagcataaagagttttccgatgaggatattatcgctcgtatgatggtaccgctctgc
ttggaaaccgtgcgctgcctggaagatggcattgtggccacgccagccgaagcagatatg
gcgttgatctatggcatcggcttcccgcctttccgtggtggtgcgctgcgctatatcgac
gccatgggcgttgcagagttcgtcaagctggcggaagggctagctgaggagttgggcccg
ctttacgcgcccaccgacaagctgcgtcagatggctcagaataacgagcaattctattcc
agtgacaactctgccacccaggcctaa
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