Vreelandella neptunia: SR894_13515
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Entry
SR894_13515 CDS
T09634
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hnp
Vreelandella neptunia
Pathway
hnp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SR894_13515 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hnp03400
]
SR894_13515 (recD)
Enzymes [BR:
hnp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SR894_13515 (recD)
DNA repair and recombination proteins [BR:
hnp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SR894_13515 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
SH3_13
Helicase_RecD
UvrD-helicase
AAA_16
AAA_28
SLFN-g3_helicase
nSTAND3
UvrD_C
NTPase_1
T2SSE
Motif
Other DBs
NCBI-ProteinID:
WQH11174
LinkDB
All DBs
Position
2908972..2911341
Genome browser
AA seq
789 aa
AA seq
DB search
MSNRDTQSMNLDLFADDAPPAAPDSTASVTPPTESTASAAQPHPALSDTAALFLLCERWV
SRGWLRDLDLALVRFLDRETQNAPPLLLLGAALASHQLGRGHVCLDIAATLEAPDFALSL
PPEGDDLNDPPPLPSHVLAKLTLPEWQAALHHSTLISDGPGNTPLVVSHSVNTSKLYLRR
YWQFEQTLHQEIAARLATIESDKTYGRQSKDHSAGPDNTCGRPLQRAKGDDSHPPILKDA
LDTLFPASNSIDWQKTACALAARSPFAIITGGPGTGKTTTVVRLLALLQTLQLAEPNAHP
LRIRLAAPTGKAAARLNESIAGQVELLPTEKLAALWEGASARDDSSTQQLQAAIPTEVTT
LHRLIGARADTRHFRHNAANPLALDVLVVDEASMVDIEMMTALFSALPASAKLVLLGDKD
QLASVEAGAVLGDLCRRADAAHYTPATAQWLAELTDHPLPEALIDPNGQPLDQAITMLRV
SHRFTETSGIGQLAQAINQPLSEALRERDKHQAVHGVLNNGYADLHHLVLKPDAQNEDSA
LERLVITGSPERFPNAGEGRTTFKGEPIAPPTGYEHYLNTLASGRPETSLAFEENGDAYD
SWAKQVLNAYSRFQLLCALRKGPWGVEGLNLRIAKTLRSEKLLFGNDHTLEKGWFEGRPV
LVTQNDYGLKLMNGDIGITMAVPDPRTPSKSLLRVAFPTSDAENPIHWVLPSRLHAVETV
FAMTVHKSQGSEFQHTALLLPQTPNPILTRELVYTGITRARDWLTVIEAKRGILNDAVTR
EVMRVSGLD
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagagacacacaatctatgaacctagacctgttcgccgatgacgcgccgccc
gctgcacctgattcaaccgcatcggtaacaccaccgacagaatcaaccgccagtgccgcc
cagccgcaccccgcgctaagcgataccgccgcgctattcctactgtgtgaacgctgggtt
tcccgtggctggctgcgggatctggatctggctctggtgcgctttctcgaccgtgaaact
caaaacgccccgccgctgctgttgctaggcgcggcgttggccagccaccagcttggccgt
ggtcatgtgtgcctggatatagccgccaccctggaagcgcccgattttgcactttcgctg
ccgccggaaggcgacgatctgaacgacccgccgccgctacccagccatgtgctggctaag
ttaacgctgcccgagtggcaggccgcgctccaccactccacgctaatcagcgacggcccc
gggaatacgcccctggtggtaagccacagcgtcaacaccagcaaactctacctacgccgc
tactggcagttcgagcaaaccctacaccaggaaatcgccgcccgattagccaccatagag
tctgataaaacctatgggaggcaaagtaaagaccattctgctgggcctgataatacttgt
gggaggccgcttcagcgggcgaagggtgacgatagtcaccccccaatactcaaagatgcc
ctagataccctattccccgccagcaacagcatagactggcaaaaaactgcctgcgcccta
gctgcccgcagccccttcgcaatcatcaccggcggccccggcaccggcaaaaccaccacc
gtggtgcgcctgctggccctgctgcaaaccctgcagctagcagaacccaacgcccatccg
ctgcgcattcgcctggccgcccccaccggcaaagccgccgcacggctaaatgaatccatc
gccggacaagtggaactgctacccacagagaaacttgccgccttgtgggagggagcttca
gctcgcgacgattcaagcacccagcaactacaagccgccatcccaactgaagtcaccaca
cttcaccgcctaataggcgcaagagccgacacccgccacttccgccacaacgccgccaac
ccgctggcgctggatgtgctggtggtggatgaagcctcgatggtggatatcgaaatgatg
acggcgctgttcagcgccctgcccgccagcgccaagctggtactgctgggggataaagac
cagttggcatccgtggaagcaggcgccgtgctaggcgacctatgccgccgcgccgacgcc
gcccactacacccccgccacggcgcagtggctggccgaactcaccgaccacccgctgccg
gaggcattaatcgaccccaacggccagccgctagaccaagccattaccatgctgcgggta
agccaccgttttactgaaacaagcggcatcggccagctcgcccaggcgattaaccagccg
ctcagtgaggcattacgggaacgggataaacaccaagccgtgcatggcgtactgaataac
ggctacgccgacttgcaccacctggtgttgaagcctgacgcgcaaaacgaagacagcgcc
ctggagcgcctggtgatcaccggcagcccggaacgttttcccaatgcaggcgaaggccgc
accaccttcaaaggcgaaccgattgcgccgcccaccggctacgagcactacctgaatacc
ctggcgagtggacggcctgaaacatcgctagcgtttgaagagaacggcgacgcttacgat
tcttgggcgaaacaagtactcaacgcctacagccgctttcagctgctatgcgcgctacgc
aaaggcccctggggagtagaaggcttaaacctgcggattgccaaaacattgcgcagcgag
aagctgctgttcggcaatgaccacacgttagaaaaaggctggtttgaaggccgaccggtg
ctggtcacccaaaacgactacggcctgaaactgatgaacggcgatatcggcatcacaatg
gcggtgcctgatccacgcactccgagtaaatcattactgcgcgtagcctttccgaccagt
gatgcagaaaacccgattcactgggtgctgccttcccgcctgcacgcggtagaaaccgtg
ttcgcgatgacggtacacaaatcacaaggctcggagtttcagcacaccgccctgctgcta
ccgcaaacgcccaacccaatcctcacccgcgagctggtctacaccggcatcacccgcgct
cgcgactggctcacggtgatcgaagctaagcgtgggatattgaatgatgcggtgacaagg
gaggtgatgagggtgagtgggctagattaa
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