Vreelandella neptunia: SR894_14895
Help
Entry
SR894_14895 CDS
T09634
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
hnp
Vreelandella neptunia
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hnp02000
]
SR894_14895
Transporters [BR:
hnp02000
]
Other transporters
Pores ion channels [TC:
1
]
SR894_14895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF2490
MtrB_PioB
LamB
Phenol_MetA_deg
Motif
Other DBs
NCBI-ProteinID:
WQH11439
LinkDB
All DBs
Position
complement(3197764..3199728)
Genome browser
AA seq
654 aa
AA seq
DB search
MSPCLRRTLLASAISSLASSALWAQDAPRLDDMVVTASGFEQQITNAPASISVVSREELE
QGHYQSVTDALRDVPGVIVTGGGRGDNGQDISIRGMPSQYTLILVDGRPQNSRESRPNGS
AGFEQDWLPPLQAIERIEVVRGPMSTLYGSDAIGGVINVITRKVAQEWHGNVQLDTVLQE
NSDSGDSRQANFYLSGPLVGDRLGLQLYGRASQRDEDNILNGYEDKSLQSLTARLSFAAT
DNHDFTFEAGITEQERESLMGNSAPSEGCRGGCSDSFNEFTHQHVAVTHSGRFDWGTSET
YLQRERSENKSRDIEITNTTAKTSAVIPLGMHMLTLGANYEEESLEDSTTNRLPDSDRSE
IENSQWAIFVEDEWMLTDSWALTGGLRVDDDDNYGSHLSPRLYSVWNMTPDWTLKGGVST
GYRAPNLREITPDWGQVSRGGNIYGNPDLEPETSLNKELALLYANESGLSGSVTLFHNDF
DDKITRIACPIDICTDGANQFGSDPTYRVNVDEAVTQGVEASVAAPLTDTVELTASYTYT
DSEQKSGEYAGEPLTQLPKHQVSASLDWQVSAKLSQWTKVTYRGEESQPTTGPSSSSIVA
PSYTFVDAGVGYQLNESTQLSAGIYNLFDETIDYDEYGYVEDGRRVWLGLNVAF
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtctccctgtttgcgccgtacgctgctggccagcgccatttcttcgcttgctagtagc
gctctatgggcacaagatgcgccccgcttagacgatatggtggtaaccgcttcaggtttt
gaacagcagattaccaatgcccccgcgtctatcagcgtggtttcccgggaagagttggaa
caaggccactatcagagtgttaccgatgcgctgcgcgatgtgcccggtgtgattgtcacc
ggcggcgggagaggggataacggccaggatatctccattcgtggtatgccttcccagtac
accctgatattggtcgatggtcgcccgcagaattcccgtgagtcccgccccaatggtagc
gccgggtttgagcaagactggctgccgccgctacaggctatcgagcgcattgaagtagtg
cgtgggccaatgtcgacgctttacggctccgatgccatcggcggggtcattaacgtgatt
acccgcaaggttgcgcaggagtggcacggtaatgtgcaactcgacaccgtacttcaggaa
aacagcgactccggcgatagccgccaagccaacttttacctgagcggcccgctggtaggg
gatcgtttaggacttcagctctatggccgtgcctcgcagcgcgatgaagacaatatcctc
aacggctatgaagataaaagcctgcaaagtcttactgcacggctgagttttgcggcgact
gataaccatgacttcacttttgaggcgggtattaccgagcaggagcgcgaatcactgatg
ggcaactcggcgccatccgagggctgtcgcggcggctgctccgatagttttaatgagttc
acccaccagcatgtcgctgtgacccacagtggtcgcttcgattggggtaccagcgaaacc
tacctgcaacgtgagcgcagcgaaaataaatcgcgggatattgaaatcaccaacactacc
gccaaaaccagcgctgttattccgctaggcatgcatatgttgacgctaggcgctaactac
gaggaagagtcgcttgaagatagtacaacgaacagactgcctgactctgatcgtagtgag
attgagaatagccaatgggcaatttttgttgaagatgaatggatgcttaccgattcctgg
gcattgaccggcggtttacgtgttgatgatgacgacaactacggtagtcatttaagtcca
cgtctttatagcgtgtggaatatgacgcctgactggacgttgaaaggcggcgtttcaacc
ggttatcgggcgcctaacctgcgcgagatcacccctgactgggggcaggtcagtcgcggt
ggcaatatttacggtaatcctgaccttgagccagagacctcgctcaataaagagctagcc
ctgctttacgccaacgaaagtggattaagcggcagcgtcacgctgttccataacgacttt
gacgataaaattacccgaatagcttgccccatcgatatctgtacggatggcgctaaccag
tttggcagcgacccgacttatcgcgttaacgttgatgaagcggtgactcaaggcgtagag
gcgagtgtggctgcgccgttaaccgataccgttgagctaacggccagctacacctatacc
gatagcgagcaaaaaagcggtgagtatgccggcgagccgttaacacagctgcctaagcac
caggtatccgcctcgttagattggcaagtctctgccaagttgagtcaatggacaaaagtc
acttaccgcggcgaagagagccaaccgactaccggcccttcgagcagttccattgtggct
ccttcctacacctttgtagatgcaggcgttggctaccagttgaacgaaagtactcaactg
agcgcgggtatctacaacctattcgacgaaacgattgactacgatgagtacggctatgtg
gaagatggccgccgggtttggttaggactcaacgtagctttctaa
DBGET
integrated database retrieval system
