Vreelandella neptunia: SR894_16465
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Entry
SR894_16465 CDS
T09634
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hnp
Vreelandella neptunia
Pathway
hnp03030
DNA replication
hnp03410
Base excision repair
hnp03420
Nucleotide excision repair
hnp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SR894_16465 (polA)
03410 Base excision repair
SR894_16465 (polA)
03420 Nucleotide excision repair
SR894_16465 (polA)
03440 Homologous recombination
SR894_16465 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hnp03032
]
SR894_16465 (polA)
03400 DNA repair and recombination proteins [BR:
hnp03400
]
SR894_16465 (polA)
Enzymes [BR:
hnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SR894_16465 (polA)
DNA replication proteins [BR:
hnp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SR894_16465 (polA)
DNA repair and recombination proteins [BR:
hnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SR894_16465 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SR894_16465 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
WQH11737
UniProt:
A0ABZ0YKC2
LinkDB
All DBs
Position
complement(3534072..3536861)
Genome browser
AA seq
929 aa
AA seq
DB search
MARAPIVLVDGSSYLYRAFHALPPLTTSNGQPTGAVKGVLNMLKRLIKDYPESPMAVVFD
APGKTFRDDLYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCIEGVEADDVIGTLAH
HATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALM
GDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVKTLTFRGAKTLPKKLEEHREQ
AFLSYQLATIKVDCELPVGLDDLDIAHPDREALVTLYKEMEFRQWLGELLEGKDEGVDDV
KGGEPAPASAEEVSSESENASTFVQASVREDQVILEQADFERWLDRLQNAERFCFDLETT
SLNYMDAEIVGVGFSLEAREAAYIPLAHDYLDAPKQLDRKTVLAALKPLLEDPTKTKIGQ
NLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALKYLGEKTISFEEIAGK
GAKQLTFNQIALEQAAPYACEDVDITLRLQQTLRPQVESEGRLAEVLDNIELPLIKVLSR
IERNGVAVDAELLHKQSQQLEQRIGELEREAFELAGREFNLGSPKQLGQILFEEQKIPVL
KKTPKGAPSTAEGVLEELALDYPLPKVIMQHRGLAKLKSTYTDKLPRLLNKATGRVHTSY
HQAVTATGRLSSSDPNLQNIPIRTEEGRKIRQAFIARPGYRIVAADYSQIELRIMAHLSE
DKGLLEAFAEGRDIHTATAAEVFGTSLEKVSGDQRRSAKAINFGLIYGMSAWGLSRQFHI
ERNQAQTYIDRYFDRYPGVARYMERIRSQAAEDGFVETVLGRRLYLPEIQSQNRNRRQGA
ERTAINAPMQGTAADIIKQAMIDVDAWLAEGEFDALMVMQVHDELVFEVAEKQVEAFIEQ
VQKRMQGAAELKVPLIVEAESGANWDEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgctccgatcgtcctcgtcgatggctcttcctatctgtaccgtgcctttcat
gcgctgccgccgctaacgacctccaatggtcagccaacgggcgcggtgaagggcgtgttg
aacatgctcaagcggctgattaaggattaccctgaaagccctatggccgtggtgtttgac
gcgccgggcaaaaccttccgtgatgacctgtacagcgactataaagcgcaccgtccgccg
atgcctgatgatctgcgcagccagatcgcgccactgcacgcctgcgtaaaagcgctgggc
ctgccgctgctgtgtattgaaggcgtcgaagcggacgatgtgattggcaccctggcccat
cacgccacccaggcgggccgcgatgcagtgatctccaccggcgataaggatatggcgcaa
ctggtcaatgcccatatcaccctggtgaataccatgaaggatgaaaccctggacgaggcg
ggcgtagaagaaaaattcggcctgccgcccgcattgattatcgattttctcgccctgatg
ggtgacaaggtggataacattcccggcgtgcccggcgtaggggaaaaaaccgctatcggc
ctgctacaaggcatgggtggtgggctggagaccatttatggcgatttagagcgagtaaaa
acgctcaccttccggggcgccaaaaccctgcccaagaagcttgaagagcatcgcgagcag
gcgtttctctcctatcagttggccaccatcaaagtcgactgcgagttgccggtgggcttg
gacgatttagatattgcccatccggatcgtgaagcgttggtcaccctgtataaagagatg
gagttccgccagtggctgggcgagctgctggaaggcaaagacgaaggtgtggatgacgtt
aaaggcggcgagcctgcgcctgcaagcgccgaggaagttagtagcgaatccgagaatgcg
agcacttttgtgcaagcctctgtccgtgaagatcaggtcattctcgaacaggcagacttc
gagcgctggctggatcgactgcaaaacgccgagcgcttctgctttgatctggaaaccacc
agccttaattacatggacgcagaaatcgtcggggttggcttttcgctggaagcgagggag
gcggcttatattccgcttgcccacgactacctggatgcacctaagcagcttgaccgcaaa
acggtgctggcggcgctaaaaccgctgctggaagacccgacaaaaaccaagattggccaa
aacctcaagtacgacatttccgtgctggccaactatgcgatttccgtggcaggccctttt
gctgacaccatgctggcctcctatgtgctcaactccaccgccacccggcacgatatggat
tcgctggcgctcaagtatctgggtgaaaagaccatctcctttgaagagattgccggtaag
ggcgccaagcagttgacctttaaccagatcgccctggaacaagcggcgccttatgcctgc
gaagatgttgatattaccctgcggctgcagcaaacgttgcgtccccaggtcgaaagcgaa
gggcgcctggccgaagtgttagacaatatcgagctaccgctgatcaaggtgctctcgcgc
attgaacgcaacggggtagcggtagatgccgagctactgcacaaacagagccaacagtta
gagcagcgcattggcgaattagaacgcgaggcgtttgagctggccgggcgcgaatttaat
ctcggctcgcccaagcagttggggcaaattctgtttgaagagcagaaaatcccggtgctc
aagaaaacgcccaaaggcgcaccctccaccgccgaaggcgttctggaggaactggcgctg
gattacccgctgcccaaggttattatgcagcatcgggggctggccaaactgaagtccacc
tacaccgataagctaccccgcttgctcaataaagccactggtcgggtacacaccagctac
catcaagcggtcaccgcgaccgggcggctgtcgtcgtcggatcccaatttacagaacatc
cccatccgtaccgaagagggacgcaaaattcgtcaggcgtttattgcccgccccggctac
cgtattgtcgccgccgattactcgcaaattgagctgcgcattatggcgcatttatctgaa
gataaagggctgttggaagcgtttgccgaagggcgtgatattcacaccgccacggcggcg
gaagtcttcggcacctcccttgaaaaggtctctggcgatcagcgccgcagcgccaaggcg
atcaactttggtttgatctatggcatgagtgcctgggggctgtcccgccagtttcatatc
gagcgcaaccaggcgcaaacctatattgatcgctactttgaccgctatcccggcgtggcc
cgctatatggagcgtattcgctctcaagcggcggaggatggttttgtcgaaaccgtgctg
gggcggcggctttatctaccggaaattcagtcgcaaaaccgtaaccgccgccaaggcgcc
gagcgcactgcgattaacgcgccgatgcagggcactgccgccgacattatcaagcaggcg
atgatcgacgtggatgcatggctcgcggaaggcgagttcgatgcgctgatggtcatgcag
gtgcacgatgagcttgtgtttgaggtagccgagaagcaggtcgaggcgtttatcgagcag
gtgcaaaagcgcatgcagggcgcggctgaactgaaagtgccgctaattgtggaagccgag
agtggcgccaattgggatgaggcgcactag
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