Vreelandella neptunia: SR894_16570
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Entry
SR894_16570 CDS
T09634
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
hnp
Vreelandella neptunia
Pathway
hnp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SR894_16570 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hnp03400
]
SR894_16570 (recB)
Enzymes [BR:
hnp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SR894_16570 (recB)
DNA repair and recombination proteins [BR:
hnp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SR894_16570 (recB)
BRITE hierarchy
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WQH11756
LinkDB
All DBs
Position
3562031..3565804
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AA seq
1257 aa
AA seq
DB search
MPPSTTSSSSAASQSSSRPLALALPLRGSQLIEASAGTGKTFTIALLYVRLVLGHGQPDD
DSHPQVNGFHMPLVPPDILVVTFTEAASQELKDRIRARLVQAAEAFRPHNESEDLSQSDP
LLAELRNDYPRATWPHCARRLEVAAEWMDDAAISTIHSWAQRMLKEHAFDSGKLFQQEVV
KDLAEMTQEAVFDYWRTRVYPLSESLAAAMVALFASPFQLHKALRPLLQRRDATLCLGGE
PLQAGDIQAQLNALIERREERQRAVAKARNTYLKDANAIHQALRDLRGQLNGNTFRDKKD
DAKFDSWLEELAAWGRGELNLDDTSFVPKLATSRFKLNRGATPPTFELHSTLEEWLSIDT
SVNEQAQTLKPHVLADAREWVSTRLAEQLAQRAQMGFDDMIQGLDKALSGDGGETLANRL
RGQFPIAMIDEFQDTDPAQYRIFDAIYRLSDNDQASSLILIGDPKQAIYGFRGGDIYTYL
DARRATSPRHHTLATNFRSSEAVVASVNQLFRHAEDTFPRGAFRFAVEGGESDNPMPFHF
VEANGRAESLLLNGNPSPALTTWLVGDDDEPINTERYLEQAARHCANQIATWLNQASHDE
AGFQQADKPFKPLKASDIAILVRDRKEAAAIRDALSARDLASVYLSDRDSVFATPEASDL
WRWLKAIAEPDVVSTLRTALATPTLGLSLYQLDNLQRDEMAWEATQERFAGYRTRWQQRG
VLPALRQLMHDYQVPERLLANAKGERRLTNLLHLAEWAQNASDALDGDHALIRLLGEQID
EPGGDEQILRLESDAELIQVVTIFKSKGLEYPIVALPFICSFKEINGKWGTPLFHSDDGR
PLLELSQKKDEAKASFEAANDERLSEEMRLLYVALTRARHATFIGLAPLKVGNSKTAQLD
KSGIGYLLAGGAKIADLSAVKAAWQTHTKACPGITQATADSDDVLYQPPVGTQALKSALA
ANHRAFTPWWIASYSSLQQKGANAPETPQAEVESEEHQPVRPAPLTGTPEVATLHAFPRG
PNPGTFLHGVLETLANEGFNLAERDSLVIARMKQGCIVRGWETHAPVLEAGITAWLNTPL
AAQGHDGPTLSSLTHYRAEPDFWFATANAKTPVLDKLVKQTLFPGESRPSLGFQQLNGLM
KGFIDLLAEYNGQYYVIDWKSNWLGPNDSAYTQDVLMRAALDKRYDMQLSVYLLALHRHL
RQTLPNYDYDRDVGGAMLVFLRGIHAPSRGVLNIKPPRTFIERLDAMMAGASDKEVS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgccgccatccaccacatcatcttcatccgcggcctctcagtcgtcttcacgccctctc
gcgcttgcgctaccgctgcgtggaagtcagctgatagaggccagcgccggtaccggtaaa
accttcaccattgcccttttgtatgtgcgtctggtgctgggtcacggccaacccgatgat
gatagccatccccaagttaacggctttcatatgccactagtgccaccggacatcctagtg
gtgacgttcaccgaagccgccagccaggagcttaaagaccgaattcgtgcgcggttggta
caggcggccgaagcatttcgcccgcataacgaaagcgaagacttaagccaaagcgatcct
ctacttgcagagttacgcaacgactaccctcgcgccacctggcctcactgcgcccgccgg
ctagaggtcgccgccgagtggatggatgatgccgctatctcgaccatccatagttgggca
caacgcatgctcaaagagcatgcctttgatagtggcaagctgttccaacaggaagtcgtc
aaagaccttgccgagatgacccaagaggcggtcttcgactactggcgtacgcgcgtctac
cctctcagcgaatcgctagcggccgccatggtggcgctgtttgcttcgccctttcagtta
cacaaggcgctgcgtccattactgcaacgacgcgatgccacgctatgcttgggcggggag
cccttgcaagcgggcgatattcaggcccaactgaacgcgctgattgagcggcgcgaagaa
cgtcaaagagccgtggcaaaagcacgtaatacctatttaaaagacgccaatgccatccat
caggcactccgcgatttgcgcggccagctcaacggcaacaccttccgggataaaaaagac
gacgccaaatttgatagttggctagaggaactagcggcctggggacgtggtgagttaaac
ctggatgacaccagcttcgtgcccaaactagccactagccgtttcaaactcaatagaggc
gccaccccgcctacgtttgagcttcatagcacactagaagaatggttaagtatcgataca
tcggttaatgagcaggctcagacgctcaagccccacgttttagccgacgcacgcgagtgg
gtctccacgcggcttgcggagcagctcgctcagcgtgcgcaaatgggctttgacgatatg
attcaagggctggacaaggcgctcagcggcgatggtggcgaaacactggctaatcggctg
cgcgggcaattccccattgcgatgatcgatgagtttcaggacaccgaccccgcgcagtac
cgtatttttgatgccatctatcggctcagcgataacgatcaagcctctagcctgatccta
attggagacccaaaacaggcgatctacggcttccgcggcggtgatatctacacctatctc
gatgcccgccgtgccacttccccgcgccaccacactctcgctaccaacttccgatctagc
gaggccgttgtcgcttctgtcaatcagctgtttaggcatgctgaagacaccttcccccgt
ggcgcctttcgttttgccgtggaaggaggcgaaagtgataaccctatgccgtttcatttt
gtggaagctaacggtcgggcagaatcgctcctgctcaatggcaatccctcccccgcgcta
acgacatggctggtgggcgatgatgacgaacccattaacacggagcgttatcttgaacag
gccgcgcgtcactgcgccaatcaaattgcgacgtggctaaaccaggcatctcacgatgaa
gcggggtttcagcaggcggataaaccattcaagccgctaaaggcgagcgatattgccatt
ttggtacgtgaccgcaaggaagctgcggccatccgtgacgcgctaagcgcacgcgaccta
gccagtgtgtatctctcagatcgtgacagcgtctttgcaacgccagaggccagcgacctc
tggcgttggctgaaagcaatcgcggagccggatgtggtttctacactacgcactgcgctg
gcgacaccgacgctcgggctatcgctttaccaactcgacaacttacaacgcgacgaaatg
gcctgggaagcgactcaagagcgtttcgcgggctatcgcacccgctggcaacaacgtggt
gtgcttcctgcgctgcgccagctgatgcacgactaccaagtgcccgaacgattgctggca
aacgctaagggcgagcgtcgtcttactaacctgctgcatctggccgagtgggcacagaat
gctagcgacgcgttggacggcgatcacgcgttgattcgtctactcggcgaacagattgat
gagcccggcggggatgaacagatccttcgcttagaaagcgatgctgagctgattcaagtc
gtgaccatttttaagtctaaggggctcgaataccctatcgtcgcgctgccctttatttgt
tcgtttaaggagatcaacggcaagtggggtacaccactgttccatagcgatgatggccgg
ccgctgctagagctttcacaaaagaaagatgaggcaaaagctagctttgaggctgccaac
gacgagcgcctttccgaggagatgcgcctactctacgtcgcgcttacgcgagcccggcac
gcgacgttcattggcctagcaccgcttaaagtgggcaatagtaaaacggcccagctggat
aaatccggcatcggctacttgctcgccggtggtgcaaaaattgctgatttgtcggccgta
aaagctgcctggcagacgcatactaaagcctgcccggggattacgcaggcaaccgcggac
agcgacgatgtcctctatcaacctccggtaggtactcaagcgctcaagtcggcgctggcg
gccaatcatcgtgcctttacgccgtggtggattgccagttactcatcgttgcaacaaaaa
ggggccaatgcgccagaaacgccccaagccgaagtagagagtgaagagcaccagccggta
cgccccgctcctcttactggcacgccagaagtagctacgttgcacgccttcccccgcggc
cccaaccccggcactttcctgcacggtgtgttagaaacgctcgcgaatgaaggtttcaac
cttgccgagcgtgattcattggtgattgcccgtatgaaacagggttgcattgtgcgcggt
tgggaaacgcacgcgcccgtactggaagccggtatcacagcgtggctcaacaccccgctt
gcggcacaaggccacgatggcccgacgctttcttcgcttacccattaccgtgctgaaccg
gacttctggtttgctactgcaaatgccaagacgccggtgctcgacaaactggttaagcaa
acactttttcccggtgaatcacgcccctcgctggggtttcagcagctcaacggtttgatg
aagggctttattgatctgctggcagaatataacggtcaatactacgtcattgactggaag
tcgaactggctaggaccgaatgacagcgcctacacccaggacgtactcatgcgcgcagcc
cttgataagcgttacgacatgcagctttcggtttatctgctggcgctgcaccgtcacttg
cgccaaaccctgcccaattatgattacgacagggatgtaggcggcgcgatgctggtattt
ctgcgcggcatccatgcaccgagccgcggcgtactcaacatcaaaccgccgcgtaccttt
atcgaacgcctggacgccatgatggcgggcgccagcgacaaggaggtttcctga
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