Vreelandella neptunia: SR894_16610
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Entry
SR894_16610 CDS
T09634
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
hnp
Vreelandella neptunia
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
SR894_16610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
LRRFIP
Ctf8
Motif
Other DBs
NCBI-ProteinID:
WQH11764
LinkDB
All DBs
Position
complement(3574660..3581109)
Genome browser
AA seq
2149 aa
AA seq
DB search
MIPGLLASEVSAALREFIVTGFETETVPFKGEFQRLVEEQQGGEAFIKGPYISVGLPFLI
GASGRDFFKGFETEFPPYAHQEQAWQRLASDRKAANTLVATGTGSGKTECFMYPVLDHCQ
RANDPGIKAIVIYPMNALATDQAKRFAKEVYQQPALKGLRVGLFVGGDGQGSKMMGPDQV
ITDKDTLRNNPPDVLLTNYKMLDYLLMRPKDQKLWAHNGQDTLRYLVVDELHTFDGAQGT
DLSLLIRRLRARFDMQPEQLICVGTSATLGGDDSVNGLLSYAGDIFSSPFGRDSVIAEQR
MSDTEFLDNIAFLNLNPQIGPEALQVALQEGLDTYLYTAYQLFFSKAPDDALSTETGRQA
LGAELKQHGQVANLLRQLKLGSGTPTFQALVNKLAAQVPQQFARQPEQALLALLSLVAHA
RDQVGRPFVQLRMQLWSRELRRIVGTLREPDVTVHISAGHVSEGEESALEHAPLLSFGDD
QPPKDQPQVRLPLVQCRECHGTAWLTRMEGGAVTDDVVETELQAIYSSFFSHHAETTLLL
PWQQGEKQSPAGTVLHNFKVCCQCGKTAAADFTGACKGCQAVNEALVRVSKPHQLKEETR
GGVNRVIHENSCPYCAAKKSLIVFGARAASLSAVAIHQLFSSRDNDDRKLLTFSDSVQDA
THRAGFFAARTWQNNVRMALTQLLESHAEPLPILQLPEQFEAFWLNHAGLQGRLSLPYYL
REFMPPDQRFSADFEHFELTGEVKAPERLLQLIRQRMLWQALEDVAWRSQVGRSLNRLGI
AALDWPLVRVEQAAAHWAETVDNTLGYRIDREAAAGFMVGLMQHMTHLGAVGLEDLRYYR
EKSGTAYLLKFLHYVPPLGPGSPRPKYPATGNGEGYELLTHSNNVQTWYERWLGCLNPEA
LVDKKQREQVIVTALEALCASGLVRQEQNESGVALWVLNPEQLAITCDIQAVECPGYRPL
HLPADHAAQWIGLPLLNASDPRRVYEHTRPLRDSLYRTLFRHGEIHRVIAHEHTGLLASS
DRVRVENSFIKGDKPWEYNLLSATPTLEMGIDIGDLSSVLLCSVPPAQANYLQRVGRGGR
RDGNSFVLTVANGRPHDLVFYADPSRMLDTPVEPPAVFLKARHVLRRQLLAYAMDCWTRA
AKGENVVPAGMQPVLDVVEKTQQDRFPYTLLTFIEHNMQEVWDGFVSHVATQLSDEDQEL
LRQYLFGGPQHSEDHLRLYVLNRLRLVADERQRMAGTIKELDKQLEKLRKQPQDEHTQAE
MMELERESAGYRGMRIRMNKRETLNFFTDEGLLPNYAFPEEGATLHSVIFRSDKAVAGSG
AEREFIKREYEYQRPAQAALTELAPESVFYAGSRRVTVTRVETAKGRNIQDWRFCPRCHY
SAPADDPSAGFSDKTCPRCRTNQWGDASARTKMLKMTQVYAFTNAKEAQLDDRSDDREPV
FFNKQMLIDFAPSDITITWVLDDKDKPFGFEFIRAANFLEVNFGRREGEEMYFDVAGEHI
QRTGFPICRECGSVQSKAAAAGKKEAVHLKSCRYSRGPKKLASGKEDLGIENCLYLYRRF
TSEGLRILLPRLATGGTEEQVNSFVAALQLGLKRRFGGKVDHLRVAYQSEPIGETDERRH
FIVLYDSVPGGTGYLHELLSRAENMQAVFQMAYEVMDRCDCYDNTMDGCYRCLLEYRNAY
GMESTSKGLALEMLKEVVKGGHEWVKNAESLSALGGNPWIDSELEARFPEALTRFSGTSC
VAEQKVRVSQDVVRGKHGYRLTIGDVGYELEPQVDLGAPEGVQFASRPDFVMWPARSELK
PVAIFLDGYRYHARTANDDLLKRQALVHAGFVVWSLNWYDINSVMGDKAMDVPLPAGMTS
PEHNHQAIAGLAVKAGVSNTAEHLSKSTFQLLLHFLCEQNTDALAKQALLFLFQCLPGKS
LADTAIKQRVLDNLRGLPASFTDLTPEPVALTGSVSLLDQHGPATLTLEVVAAQELLTTL
DLTRVMATLVYDINNSSEDAARYQWQRLWTAFNFLQFLPVFYAWTPESKSSGIAAGFLWP
EQQAPLEKASSEQYPEWFTLLDESLAMALKGHDIVWPAQARVAEELTAGEFDEVVGEVEL
QFDAQKVALLLEEIEDQAAARPYLEADGWHICTSVDALAATLHELDSGA
NT seq
6450 nt
NT seq
+upstream
nt +downstream
nt
atgatccccggcctacttgctagtgaagtctctgccgccctgcgcgaatttattgtgact
ggttttgaaaccgaaacggtgccattcaaaggcgagtttcagcgcttggtggaagagcag
cagggcggtgaggcgtttattaaagggccatatatttcggtgggcttgccgttcttaatc
ggcgcatcggggcgagatttttttaaggggtttgaaacagagtttcctccttatgctcat
caagagcaggcgtggcagcgcctggcctctgatcgaaaagcggcgaataccctagtcgct
accggcacaggatcaggcaaaaccgagtgttttatgtacccggtgcttgatcactgccag
cgggcgaatgaccctggtattaaagccatcgtgatttacccaatgaacgcgctggcgact
gaccaagctaagcgttttgccaaagaggtttaccagcaacctgcgctaaaaggtctgcga
gttgggctatttgttggcggtgatggccaggggagtaagatgatggggccagatcaggtc
atcacggataaagacaccctgcgcaataacccaccagacgtactgcttaccaactataaa
atgttggattacctgctgatgcgcccaaaagatcaaaagctgtgggcgcacaatgggcaa
gatacgctgcgttatttggtggtcgatgagctacacacctttgatggtgcccagggaaca
gatctttctttgttgatccgtcgtttacgggcacgctttgatatgcagcccgagcagctt
atttgtgtaggcacttctgcaacgctgggcggtgatgacagtgttaacgggctgctttcg
tatgcgggggatattttctccagcccgtttgggcgtgattcggtgattgctgagcagcgc
atgagtgacaccgagttcctggataacatcgcgtttttgaacctaaatccgcaaattggc
ccagaagcgttacaggtggcgttgcaggaagggttagatacgtatttgtatacggcttat
cagctgtttttcagtaaggcacctgatgatgcgctctcgacagagacaggacgccaagca
ttaggggcggaattaaagcagcatggccaagtggctaacttgctgcgccagttaaagctg
ggtagcggtacgccaacgttccaagcactagtcaataaattagcggcgcaggtgccacag
cagtttgcacgccagcctgagcaggcgttgctggcgctgttgtcgttggtggcccatgcg
agagatcaggtcgggcggccctttgtgcaactgcgtatgcagctgtggtctcgggaacta
cgacggattgtgggaacccttcgggagcctgatgtcactgttcacatatctgcagggcat
gtatccgaaggagaagaaagcgctctagaacatgctccgctgttgtcgtttggtgacgac
cagccgcccaaagaccagccccaggtgcgcttgccgttggtgcagtgtcgtgagtgccat
ggcactgcgtggttaacccgtatggaaggcggagctgtcaccgatgatgtggtggaaaca
gagcttcaagctatttattccagcttttttagccaccatgcggaaaccaccttgttactg
ccttggcagcagggcgaaaaacaatctcctgctggcacggtgcttcataattttaaagtg
tgttgccagtgtggcaaaacagcagcagccgattttactggcgcatgtaaagggtgccag
gcagtcaatgaagcgctggtgcgagtaagcaaaccacaccagctaaaagaagaaacccgt
ggtggcgtgaatcgcgtgattcatgaaaacagctgcccttactgtgcggctaaaaagtcg
ttaattgtgtttggtgcgcgggctgccagcctaagcgcagtggccattcatcagctattt
agcagccgtgataacgacgatcgcaagctgctgaccttcagtgactcggtgcaggatgcc
acccatcgggcaggctttttcgctgcgcgtacctggcaaaataacgtgcgtatggcgtta
acccaactgcttgaaagccacgctgagccgttacccattctgcagctacctgagcagttt
gaagcgttctggctgaaccatgcaggccttcaggggcggctgtcgctgccctactatctg
cgtgagtttatgccacccgaccagcgctttagcgctgattttgagcactttgaattaacc
ggcgaagtgaaagccccggaacgcctgctgcagttaattcgtcagcgtatgttgtggcag
gcattggaggatgtggcctggcgttcccaggtggggcggtcactcaatcggctgggcata
gcggcattggattggccgttggtacgggttgaacaagccgccgcgcattgggctgagacg
gtagataatacgttgggttaccgaatcgatcgtgaggcagccgctgggtttatggtgggt
ttgatgcaacacatgacccatttaggtgcggttggtttagaggatttgcgatattaccga
gaaaaatcgggtactgcgtatttacttaaatttttgcactatgttcccccgctggggcct
gggtcgccgcgcccaaaatacccagcgacgggtaacggtgaaggctacgagctacttaca
cacagcaataatgttcaaacttggtacgagcgctggttagggtgcttaaatcctgaagcg
ctcgttgataaaaagcagcgtgagcaagttatcgtcactgctttagaagcgctgtgtgct
tccgggttagttcggcaagaacaaaacgaaagtggtgttgcgctttgggttcttaaccca
gaacaactagccattacttgcgatatacaggccgtagaatgcccaggttatcggccgctt
catttacctgccgaccatgctgcccagtggataggattgccattgctcaacgcatccgac
ccacgtcgggtatatgagcatactcgaccgttgcgtgattcgctgtatcgtacgctattc
cgacacggtgaaattcaccgcgtgattgctcacgaacataccggcttgctggccagtagt
gaccgggtgcgggtggaaaacagctttataaaaggtgacaaaccttgggaatataacctg
ctttcagcgacgccgacgctggaaatggggattgatattggtgacctgtccagcgtattg
ctatgttccgtgccacctgcgcaagccaattatttgcagcgggtaggacgcggtggtcgc
cgggacggcaactcatttgtgttaaccgtagctaacggtcgaccccatgatttggtgttt
tatgccgaccccagccgaatgctggatacaccggtagaacccccagctgttttcctaaaa
gcacgccatgtgttgcgccgccagctgttggcctacgcgatggactgctggacccgtgcg
gcaaagggcgaaaacgttgtgcccgccggcatgcagccggtattggatgtcgttgagaaa
acgcagcaagatcgttttccctacacgctgctgacttttattgaacacaacatgcaggaa
gtgtgggatggctttgtcagccatgtggcaacccaattaagtgatgaagaccaagagcta
ctgcgccagtatctgtttggtggcccccagcatagtgaagatcatctgcggctctatgtg
ctgaatcgactcaggttggtcgccgatgagcgtcagcgaatggcgggtacaattaaagag
ctagacaagcagttagaaaagctgcgcaagcaacctcaggatgagcatactcaagcagaa
atgatggagctggagcgggagtcagcaggctaccggggaatgcggatacgcatgaataag
cgcgaaacgcttaacttctttaccgatgaaggcctactaccgaattacgcgtttcccgaa
gagggcgcgacacttcattcggtgattttccgctcggataaagccgtcgcgggcagcggt
gccgagcgcgagttcatcaagcgcgaatatgaataccagcgtcctgcccaggcggcactc
accgagctggctcctgaatcggtgttttatgcgggtagccgacgtgtcaccgtaacccgt
gtggaaacggctaaaggccgtaatattcaagactggcgattctgcccccgttgccactac
tccgccccagcggatgaccccagcgctgggtttagtgataaaacctgcccgcgttgccgt
accaatcagtggggtgatgcaagcgcacgcaccaaaatgctgaaaatgacccaggtgtat
gcgtttaccaatgcgaaagaagcacagttggacgatcgctctgatgatcgcgagccggtg
ttcttcaataagcagatgttgatcgactttgcaccgtcagacatcacgattacctgggtg
ctggatgataaggataagccctttgggtttgagtttatccgggcggctaacttcttggag
gtgaattttggccgacgagagggcgaggagatgtactttgatgtggccggtgagcatatc
caacggactgggtttcccatttgcagagagtgcggttcggtgcaatcaaaagcggcagcc
gccggtaaaaaggaggctgttcacctaaagtcatgccgctactcccgtggacctaaaaag
ctagcgagcggtaaagaagatcttggcatcgaaaattgcctatatctttaccgccgtttt
acctcggaagggctgcgaattttactgcccaggttggcgacgggtggcacagaggagcag
gttaattcctttgtggcagctttacagctggggctaaagcgccgctttgggggtaaggtt
gatcacttgcgagtggcatatcaaagcgagccaataggtgaaaccgacgagcgtagacac
tttattgtgttatatgactcggtgcctggtggaacaggttatttgcacgagcttttaagc
cgcgctgagaacatgcaggccgtgtttcagatggcgtatgaagtgatggatcgctgcgat
tgttacgacaacaccatggatggttgttaccgctgcctgcttgaatatcgcaatgcctac
ggcatggagagcaccagcaaagggctggcgctagaaatgcttaaagaggtagtaaaaggg
ggccatgagtgggtcaagaacgcagagtcactgagtgccttgggtggcaacccctggata
gacagcgaactagaagcgcgttttcctgaagccttaacgcgtttttcgggcacctcctgc
gtagcagagcagaaggtacgggtttctcaggacgtggttcgtggtaagcacggctatcgt
ctgacgataggcgatgtaggttatgagctggagccacaggtagatttgggcgctcctgaa
ggtgttcagtttgccagtcgcccagattttgtgatgtggccagcacgtagtgagctaaaa
ccggtggctattttcctagatggctatcgataccatgctcgtaccgctaacgatgactta
ctcaagcgccaagcacttgttcatgcaggttttgtggtgtggtcgctcaattggtacgac
atcaatagtgtgatgggcgataaagccatggatgtgcccctaccagcgggaatgacatcc
cctgaacacaatcatcaggcaattgcaggtttggccgtgaaggctggagttagcaacacg
gcggaacatttaagtaaatcgactttccagctgttgctgcattttctttgcgaacagaat
accgacgccctggcaaaacaggcattactgtttctctttcagtgcttgcctggaaaatct
ctggctgacaccgctatcaagcagcgggtgctggataacctaaggggtttacccgcctcg
tttactgacctaacacctgaacctgtagctctcacgggtagcgtttcactgttagatcag
catggacctgccacgctgaccttagaggtagtggctgctcaagaattgctgaccacttta
gatttgactcgcgtgatggcaacgctcgtctacgacattaacaacagcagtgaagatgct
gcccgctatcaatggcagcgcttatggacagcctttaatttcctacagttcttgccggtg
ttctatgcatggacgccggagtcgaaaagcagtggtattgcggcgggttttctatggcca
gagcagcaggcacctttagagaaggcttcttccgagcaatatcctgagtggtttactttg
ttagatgaatcgctagcgatggcacttaaaggacacgatattgtatggcccgctcaggcg
cgggtggctgaagaactgactgcaggagagttcgatgaggtggtgggggaagttgagctt
cagttcgacgctcaaaaggtcgcgctgttgttagaagaaatagaggatcaagccgccgca
agaccttatttggaagccgatggctggcacatctgcacgtctgtcgacgcgttggcagcc
accttacatgaattggactcaggagcttaa
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