Vreelandella neptunia: SR894_17270
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Entry
SR894_17270 CDS
T09634
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
hnp
Vreelandella neptunia
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hnp03000
]
SR894_17270
Transcription factors [BR:
hnp03000
]
Prokaryotic type
Helix-turn-helix
Other families
SR894_17270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
AAA_2
AAA
Mg_chelatase
AAA_16
AAA_7
TsaE
TIP49
Torsin
Motif
Other DBs
NCBI-ProteinID:
WQH11884
LinkDB
All DBs
Position
complement(3712859..3714442)
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AA seq
527 aa
AA seq
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MQVKALDQRSASDAQPLAGLAAMPMALALVESTTPRELRLRSRQLLGNSLGLAWVECLYL
DSSGRWVGRDNSEARFNCDEFSHPYAHAIRTGKPVTLGVGEARTRLDHPGFQAQIASLSG
DLRLHVRPLRLQDSSREWLGVLAFVTEAATLTKLMECSDFVAFEALLCRLWSRLASSQGE
RQKSAVLRDSLAKLNDNTRRQGLAAKLASDLLGNSIAMQELRQQVIRAAETNLAVLLQGE
TGTGKDVVARAIHRFSARAKAPFMAINCAAIPESLLESELFGHSKGAFSGADQAREGLIA
QADGGTLFLDEIGDMPLALQAKLLRVLESGRYRPLGSNEERCADLRLIAATHQPLREQIK
QQRFRADLYYRLGQFPLSLPSLSARREDIAFLAEHFVADFCAREERSEMGITPAALRQLK
ERDYPGNVRELKNLIDYACAMTPAGGDIEALLLPSDTASGADSATPETSATLSKIHDLRQ
AVRDYEAQLISQRLLYYGGNRALAAESLGIPKRTLSHKCQLLELDAK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtaaaggctcttgaccagcgctccgctagcgatgcacagcctttagccgggctg
gcggctatgcccatggcgcttgcgctggttgaaagtaccactccacgggagctgcgttta
cgcagccgccaactgctgggtaatagcctgggtctggcgtgggtagagtgcctctatcta
gacagcagcggtcgctgggtgggccgtgataatagtgaggcgcgcttcaactgtgatgag
tttagtcacccctacgcccatgccatccgcaccggtaaaccggtgacactgggcgtgggg
gaggcgcgtacccggcttgatcatcccggttttcaagcccaaatagcctcccttagcggt
gatttgcggctacacgtgaggccgttacgactccaggacagttcccgtgagtggctaggc
gtgctggccttcgtcacagaagcggcaaccttgacgaaacttatggagtgtagcgatttt
gtcgcttttgaggccctgttgtgccggttgtggtcgcgcctggcaagtagtcagggagag
cgacagaaatcagcagtattgcgtgactcgttagccaagctcaacgacaacacccggcgc
caggggttagcggccaagctggcgagtgatttgctgggtaactccattgccatgcaagag
cttcggcagcaggtgattcgtgcggccgaaaccaatttagcggtgctactgcagggcgaa
accggcaccggcaaagacgtcgtggcgagagcgattcaccgtttctcggcacgcgccaag
gcgccgtttatggcgattaactgtgccgcgattcccgagtcgctgctggagtcggagctg
ttcggccactctaaaggggcgttttcaggcgctgaccaggccagggaagggctcatcgcc
caagccgatggcggtacgctgtttctggatgaaatcggcgatatgccgctagcgctgcaa
gccaaactgctcagggtactggagagcggccgttatcggcccctagggtcgaatgaagaa
cgctgtgcagacctgcgtctgatagcggctacccaccagccgctacgcgagcagatcaaa
cagcagcggtttcgcgctgacctctactatcgcttaggccaattcccgctttcactgcct
tcactgtcggcacggcgtgaagacatcgcctttctggccgagcactttgttgctgatttc
tgtgcccgggaagaacgcagtgagatgggcatcacacctgccgcgttgcggcagctaaaa
gagcgtgattaccccggcaacgtgcgcgagctcaaaaacttgatcgattatgcctgcgcc
atgacccctgccggtggtgatattgaagccttgctcctgcccagcgataccgccagtggt
gctgattcagcgacaccagaaaccagcgccacgctgagtaagatccatgatctgcgccaa
gcggttcgcgattatgaagcgcaactgattagccagcgattgctttactacggcgggaat
cgtgcccttgcagcagagagcctgggaatacccaagcgaacgctctcccataaatgccaa
ttgctagaactggatgctaaatga
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