Vreelandella neptunia: SR894_18890
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Entry
SR894_18890 CDS
T09634
Name
(GenBank) RHS repeat-associated core domain-containing protein
KO
K28298
toxin protein Tse5
Organism
hnp
Vreelandella neptunia
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
SR894_18890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
DUF6443
RHS
TEN_YD-shell
OCRE
Motif
Other DBs
NCBI-ProteinID:
WQH15234
LinkDB
All DBs
Position
4079416..4083126
Genome browser
AA seq
1236 aa
AA seq
DB search
MNPLLGAKLLPAETDFALPAPRPFVFSRGYLSSNEQIGALGQGWSLPGESLAITLNDDAC
IVHDAQGRAITFGPLAPGQARFSPTEQLWIRRGGASVDEESNAPRWQALDETLRNDPERI
VLSDASGLYYVFADNASSATESAAADSGRWPLIEERDRNGYTTQYRWEGGLLVRVIDSAQ
RHYQLVYDGLLPAMQDDTGQRLTGVKLVQAHDGEAADEWLVRYSYSPAGDLIAVRHRHGE
VVREFEWQDHMLTAHRVPGGMEAHYTWDRHAPDGRVVGQQEAGGLARTYSYQVDHTLVTD
SLGREERYHFVGSGPGRRWTAHTRADGSRIEFRYDRAGLKVATVDPLGHETLIERDDHGQ
VIAQTGPDGTRWAIERDALGQPVSIEGPDNQTWKITRNERGLPVDVTGPEGTTAFAYDNE
QLPDRPTTLTDAGGATHQREWNALGQMTAQIDCSQQRTEYAYDRNGYLASVTNALGETTR
TQHDEMGRRIATQLPDGLYWHHHMDSLGRLVELEGPQGFRQQFFFDDHGRPVQRIEADGS
QQFTAYDDIGRLSELTLGNGAVYRFAYDEMDRLASETGPDGREQQYRYDEFGRLIERIEA
NRPGPDGQPLVTRYDYDQAGRLTARHLPATEHAPASTEQYQWGANGQLLSVTNDHGEVNF
SYDDAQRLIGEQQQHAGESGWSWQHQHSLTATGAPKASQFGELPALNWHTYGSGHLHGMS
APGLDLEIALEPDALHRETQRRLSTGANAHNQPLVLERGYTNLGQLDHLTLRSPDTTSQQ
DYQYDALGRMSFRSLQGDPAEKVIAYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLEGQQP
LSDNRLGQLNGTRYRYDGAGNLIERQQPNGERLTLGYDGANRLVHLIHASELGATREATY
RYDGLGRRISKTVRHPSGTTATTHYGWDGDRIVREETDNQRATVVYEPGSFVPMLRIDDT
EQGQVLSAYITDALGTPMQLVAPNGQPRWLAEPDDWAAVKNQRAVRNLTQPIRFQGQWHD
EESGLYYNRHRYYDPQQGRYISQDPIGLNGGTNLYGYVTNPTGMVDPLGLLGANMHQLDP
ISVAIQNGHTRPRPEPERITDVFNPAERVREGLSTTAEAGGQLVIGVGGSTSTGVIVNPR
TGLACTVHTMCAMAGPRIGAGTIASATGATGSFEPGDVSYSIAGEGAWIFTKADLGIANT
GSVSASAGTIFGADFGGAIKMCRTEVSNTCWNEGKE
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccgctgctgggcgccaagctgctgcccgcagagaccgactttgccctcccggcg
ccacggccgtttgtgtttagccgtggctacctctccagtaacgaacaaataggtgccctg
ggtcagggctggtcactcccaggcgagtccctggcaattacccttaacgacgacgcctgt
attgtccatgatgctcagggtcgtgcgattacctttgggccactggcccccggtcaggcg
cgcttctcgcccaccgaacagctgtggattcgccgtggcggtgcctcagtcgatgaagag
agcaacgcgccccgctggcaagctctggatgagacattgcgcaatgatcctgagcgtatc
gtccttagcgatgccagcggcttgtattatgtcttcgcggataatgcctcttctgcgaca
gaaagcgctgctgctgattccggccgctggcccttaatcgaagagcgcgaccgcaatggc
tacaccacccagtaccgctgggagggtggtctattggtgcgggtcatcgacagcgcccag
cgccactaccagctggtttacgatggcttgctacccgccatgcaggacgataccgggcaa
cgcttaaccggcgttaagctggtgcaagcccacgacggcgaagcagcggacgagtggttg
gtacgctactcctatagtcccgccggcgacctgattgcggtacgccaccgccacggcgag
gtagtgcgggagtttgagtggcaagaccatatgctcaccgcccaccgggtacctgggggc
atggaagcccactacacctgggatcgccacgccccggatggtcgcgtggtgggccagcag
gaagccggcggtttagcgcggacgtacagctaccaagtggatcacaccctggtcaccgac
agcctgggccgggaggagcgctaccactttgtgggcagcggccccggccgccgctggacg
gcccacacccgcgccgacggctcgcgcattgagttccgctatgatcgtgcgggcctcaag
gtagcgacggtagatccgctgggtcacgagacgctgattgaacgggatgaccacgggcaa
gtgattgcacagaccggcccagacggcacgcgctgggccattgagcgcgatgctctggga
cagccggtgagtatcgaagggcctgacaatcaaacgtggaaaattacgcgcaacgaacgg
gggcttccagtggacgtcaccgggccggagggcactaccgccttcgcctatgataatgaa
cagttacctgaccgcccgactactctcaccgatgcgggtggcgccacccaccagcgggag
tggaacgctctaggccagatgaccgcccagatcgactgctcccagcagcgcaccgagtac
gcctacgaccgaaacggctatctggccagcgtcaccaacgccctaggtgaaaccacccgc
acccagcacgacgagatgggccggcgtatcgccacccagctccccgacgggctctactgg
catcaccatatggactctctaggacgcttggtagagctggaaggcccgcaaggttttcgt
cagcagttcttcttcgatgaccacggccgcccggtgcagcgcatcgaagccgacggcagc
cagcagtttactgcctatgatgacattggccgcttgagcgaactaaccctgggcaacggc
gcggtctaccgctttgcttacgatgagatggatcgcttagccagcgagaccggccccgat
ggccgggagcaacagtatcgttacgatgagttcgggcgcttgatcgagcgcattgaggcc
aaccgtccaggccccgacggccagccgctggtcacccgctacgactatgaccaagccggt
cgcctgacggcccggcacctacccgccacagagcacgccccggccagcacggagcagtac
cagtggggtgccaatggtcagctacttagtgtcaccaacgatcatggcgaggtgaacttc
agctacgacgacgcccagcgcttaatcggcgaacagcagcaacatgcaggagagagtggt
tggagctggcaacaccagcatagcctgacggctaccggcgcgcccaaggctagtcagttc
ggtgaactaccggcgctcaactggcacacctacggcagcggccatctgcacggtatgagt
gcccccggcctggaccttgagatcgccctggagcccgatgccctgcaccgggagacccag
cgccgtctcagcaccggtgccaatgcgcacaaccagccgctggtgctggagcgcgggtat
actaacctgggccagctggatcatctcaccctacgcagcccggacaccactagccagcag
gactatcaatacgacgccctggggcggatgagcttccgcagcctgcaaggcgatccagca
gaaaaagtgattgcttacagctacgacgctgccgggcgcttgatcggcagccaacacggc
gaccacgcccaccgctatagcgtggacgcggccggtaatcggttagaaggccaacagccc
ctttctgataaccgtctggggcagttaaacggtacccgctaccgctacgacggcgccggt
aacctgatcgaacgccaacagcccaacggcgaacgcttaaccctgggctacgacggcgcc
aaccgcttggtacatctcatccacgccagcgagctgggggcgacccgcgaagccacctac
cgctacgatggcctgggaagacgcatcagcaaaaccgtacgccaccccagcggcactacc
gccaccacccactacggctgggacggcgaccgcatcgtgcgggaagaaacggacaatcag
cgcgctaccgtggtctacgagccgggcagttttgtgcccatgctacgtattgatgatact
gaacaaggccaagtgctcagcgcctatatcaccgacgccctgggcaccccgatgcaacta
gtcgcccccaacggccaaccccgctggctggccgaacccgacgactgggcagcggtcaaa
aaccagcgcgccgtgcgcaacctcacccaaccgatccggttccagggtcagtggcacgat
gaagagagtgggctttactataaccgtcaccggtactacgacccgcagcaggggcggtat
attagccaggatccgattgggctcaacggtggcacgaatttgtatgggtatgtgacgaat
ccgacggggatggtggatccgctggggttacttggggcaaatatgcaccagttagacccg
atttctgtcgctattcagaatgggcatacgcgcccgcgaccggaaccagagagaataaca
gatgttttcaatcctgctgaaagggttagagaaggactctctacgactgctgaggcaggt
ggacaactggttattggggtcggtgggagcacgtcgacaggagtaattgtaaacccaaga
acaggcctagcatgcaccgttcacacaatgtgtgcgatggcgggccccagaataggagca
ggtacaattgctagtgcgacaggtgcaacggggtcttttgagccgggggatgttagttac
agcattgctggagaaggggcttggatatttacaaaagctgatcttggtatagctaacacc
ggctctgtatccgcaagtgctgggacgatttttggagcagactttggtggtgcaataaaa
atgtgtcgcacagaagtctcgaacacctgctggaacgaaggaaaagaatga
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