Vreelandella neptunia: SR894_19130
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Entry
SR894_19130 CDS
T09634
Name
(GenBank) sarcosine oxidase subunit alpha family protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
hnp
Vreelandella neptunia
Pathway
hnp00260
Glycine, serine and threonine metabolism
hnp01100
Metabolic pathways
Module
hnp_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SR894_19130
Enzymes [BR:
hnp01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
SR894_19130
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
SR894_19130
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
NAD_binding_8
Pyr_redox_3
HI0933_like
GIDA
DAO
AlaDh_PNT_C
Pyr_redox
Thi4
FAD_binding_3
3HCDH_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
WQH12241
UniProt:
A0ABZ0YJH1
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All DBs
Position
complement(4140717..4143767)
Genome browser
AA seq
1016 aa
AA seq
DB search
MSQSKQQVYRLNTGGRIDRSRTLSFTFNGQRYQGHPGDTLASALLANGVDIVNRSFKYSR
PRGIVAAGAEEPNAIVQLGSSEAAQVPNVRATQQALYDGLAASSTNGWPNVQRDLMGLFG
KLGGQFMPPGFYYKTFMAPASMWLTYEKYIRKAAGLGRSPMEADPDNYDHFNQHCDVLVV
GAGAAGLAAALAAARSGARVIVADEQEEMGGSLLASRETLEGKPADQWVARVMDELAGCE
NVTLLPRTTANGYHDHNFVTLHERRTEHLGDTAPVENGHRQVRARLHRVRAGQVILSTGA
HERPLVYAGNDVPGNLLAGAVSTYIRRYGVAPGRKMVLSTSNDYGYRAALDWKESGCEVV
AIVDAREAPAGDWVDAARAQGIKIITGSAVIEAKGSNRVTAARVAKIDIEAFKVSGPVQE
LACDTIASSGGYSPVIHLASHTGARPNWRDDIIGFVPGLVKGVQACGGANGCYALGDVLA
EGVEAGIKAAAAMGHAVQTVTLPSAERLQQGPAVALFQVPHEKPTLRGPKQFVDLQNDVT
AAGIELATREGFESIEHIKRYTAMGFGTDQGKLGNINGMAIAARCLNRSIPEVGTTVFRP
NYTPVTFGAIVGRHCRDLFDPERYTALHQWHVERGAEFEDVGQWKRPWYYPEKVNGKTET
MHEAVARECLAVREKVGILDASTLGKIDIQGPDAREFLARVYTNKWEKLAVGKCRYGLMC
KDDGMVTDDGVTSCLAENHFLMTTTTGGAAAILEWLELWHQTEWPELDVYFSSVTDHWAT
MTITGPEARKLLAEISDIDLDRDSFKFMDWRSGKVAGVPARVFRISFTGELTFEINVQAN
YAMHVWQTLFKHGEKYGLTPYGTETMHVLRAEKGFIIVGQETDGSVTPEDLGMQWCVGYD
KPYSWIGKRALTRSDTKRENRKQLVGLRPKDPKVILEEGAQIVLDPKHAIPMPMVGHVTS
SYYSPILDSGFALAVVKGGHQKLGETVYLPMADGQTHEAEIVSTVFYDPKGERQHV
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtccaagcaacaagtgtaccgccttaacacgggcggccgtatcgatcgctcc
cgcacgttgagctttacctttaacggccagcgttaccaagggcaccctggggatactctg
gcctcagcgctgctagctaacggtgtggatatcgttaaccgcagctttaaatactcccgg
ccccgcggcattgtcgctgcgggtgctgaggagcccaacgccatcgtacagctaggcagc
agtgaagcggcccaggtgcccaatgtacgcgccacccagcaggcgctatatgacggcctg
gccgccagcagcaccaatggctggccgaacgtacagcgcgacctgatgggcctgttcggc
aagctgggcggtcagttcatgccgccgggcttctactacaagaccttcatggcaccggcc
tcgatgtggctgacctacgagaagtacatccgcaaggcggcggggctgggtcgcagcccc
atggaagccgatccggataactatgatcacttcaatcagcactgcgatgtgctggtcgtt
ggcgcaggcgccgcaggacttgcggcggcgctggccgccgcgcgcagcggcgctcgggtg
atcgttgccgatgagcaggaagagatgggcggctcgctgctggccagtcgtgaaaccctg
gaaggcaagccagcggatcagtgggttgcccgggtgatggacgagttggcgggctgcgag
aacgtcacgctgctgccacgtactacggccaacggttatcacgatcacaatttcgttacc
ctgcatgagcggcgcaccgaacacctgggcgatactgcaccggtggaaaatggccaccgt
caggtacgcgcacgcctgcaccgggtacgcgctggtcaggtgatcctgtccacgggcgcc
cacgagcgtccgctggtatacgcgggcaatgacgtgccggggaacctgctggctggcgct
gtgtcgacctacattcgccgctatggcgtggcaccgggccgcaagatggtgctctccacc
agcaacgactacggctaccgcgctgccctggactggaaagagtccggctgcgaggttgtc
gctatcgtggacgcccgtgaggcgccggcgggcgactgggtcgatgccgctcgcgctcag
ggcatcaaaattattaccggcagcgccgttatcgaggcgaagggcagcaatcgggtcacc
gcggcacgagtcgccaagatcgatattgaggcttttaaagtgagcggcccggttcaggag
ttggcctgcgataccatcgccagctccggcggctacagcccggtgattcacctggcttct
cacaccggggcgcggcctaactggcgcgacgatattattggcttcgtgccggggctggtg
aagggcgttcaggcctgtggcggtgccaacggctgctatgccctgggtgacgtgctggca
gaaggtgtcgaggcgggcatcaaggcagcggccgccatgggccatgccgttcagacggtc
actctgccgagcgctgagcgtctgcagcaagggcctgcggtggccctcttccaggtgcct
cacgagaagccaacgctgcgcggccccaagcagttcgtcgacctgcagaacgacgtcacc
gcggcgggtatcgagctggcaacccgggaaggcttcgagtccatcgagcacatcaagcgc
tataccgcgatgggcttcggtacggatcagggcaagctgggcaacattaacggcatggcg
attgccgcccgttgcttgaatcgctccattcccgaggtgggcactacggtgttccgtcct
aactacaccccggtcacctttggcgccatcgttggtcgccactgccgtgacctgttcgac
cccgagcgctacaccgcgctgcaccagtggcacgtagagcgcggcgccgagttcgaggac
gtcggtcagtggaagcgcccctggtactacccagagaaggtgaatggcaagaccgagacg
atgcatgaagcggttgcccgcgagtgtctggcagtgcgcgagaaggtcggtatcctcgat
gcctcaacgcttggcaagatcgatatccaggggccggatgcgcgtgaattcctggcgcgg
gtctacaccaacaagtgggagaaactggcggttggtaaatgccgttacggcctgatgtgt
aaagacgatggcatggtcaccgacgacggtgtgaccagctgcctggctgaaaaccacttt
ttgatgaccaccactaccggtggcgctgccgcgatcctggaatggctggagctgtggcat
caaaccgagtggccggaactggatgtctacttctcttcggtgactgaccactgggccacc
atgaccatcactggcccggaagcgcgcaagctgctcgccgagatcagtgatatcgatctt
gaccgcgatagcttcaagttcatggattggcgctccgggaaagtggcgggcgtgccggca
cgggtctttcgcatctcctttaccggcgagctgaccttcgagatcaacgtgcaagccaat
tatgccatgcacgtgtggcaaaccctgttcaaacatggcgagaagtacggcttgacgcct
tatggcaccgaaaccatgcacgttctgcgtgctgaaaagggcttcatcatcgtgggacag
gaaaccgacggctccgtgacgccggaagacttgggtatgcagtggtgcgtaggctacgac
aagccctactcatggattggtaagcgggccctgacgcgcagtgacaccaaacgcgaaaac
cgcaagcagttggtggggctccggcccaaggatccgaaggtgatcctcgaagagggggcc
cagattgtgcttgatcccaagcatgcgattcccatgccgatggtggggcatgttacctcc
agctactacagcccgattctggattcaggctttgcgctagcggtggttaagggtggccat
cagaagttgggtgaaacggtttacctgcccatggcagacggccagacccatgaagctgaa
atcgtcagcactgttttctacgatcccaagggagagcgccagcatgtctaa
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