Vreelandella neptunia: SR894_21415
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Entry
SR894_21415 CDS
T09634
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hnp
Vreelandella neptunia
Pathway
hnp00300
Lysine biosynthesis
hnp00470
D-Amino acid metabolism
hnp01100
Metabolic pathways
hnp01110
Biosynthesis of secondary metabolites
hnp01120
Microbial metabolism in diverse environments
hnp01230
Biosynthesis of amino acids
Module
hnp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SR894_21415 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SR894_21415 (dapF)
Enzymes [BR:
hnp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SR894_21415 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WQH12670
UniProt:
A0ABZ0YKM8
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All DBs
Position
complement(4634410..4635243)
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AA seq
277 aa
AA seq
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MLLHFTKMHGLGNDFVMVDLVTQRARLDEAQIRTLADRRFGIGFDQLLVVEPPRDPEMDF
RYRIYNADGSEVENCGNGARCFARFVRDQRLTHKHEIHVETAGGPLVLTVQHDGMVRVDM
GRPRFSPLALPFDAPGDQPLHQLEVGDETLQIGVVSMGNPHAVLQVDSVDKAPVERLGPL
VEAHPRFPKRVNVGFMQVLSPSEIRLRVYERGSGETLACGTGACAAVASGIRQGLLKSPV
KVHLLGGELSIEWPDPEGALTMVGPATRVFDGRVALN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacacttcaccaaaatgcatggcctgggcaatgactttgtcatggtggatctg
gtcactcagcgcgcgcggctggacgaagcccaaatccgcacgctggcagatcggcgtttc
ggcattggctttgaccagctgttggtcgtcgagccgcctcgcgatcccgagatggatttt
cgctaccgcatttacaatgccgacggcagtgaagtggaaaactgcggcaatggcgcgcgc
tgttttgcccgcttcgtgcgcgatcagcggctaacccacaagcatgaaattcatgtggaa
accgccggagggccgttggtgctgaccgtgcagcacgacggcatggtgcgggtagatatg
ggccgcccgcggtttagccctctggcgctgccgttcgatgccccaggggatcaaccccta
catcagctcgaagtgggcgatgaaacgctgcagatcggcgtggtctccatgggcaacccc
catgcggtgctgcaggtcgacagcgtggataaagccccggtcgagcgcctagggccattg
gtcgaggcgcatccgcgttttcctaagcgtgttaacgtgggctttatgcaggtactctcg
cctagtgaaattcgtttgcgcgtgtacgaacgcggcagcggagaaaccctggcctgcggt
accggtgcctgcgccgcggtggccagcggcattcgtcaggggctgctgaaaagccccgta
aaggttcatttgcttggtggagagctcagcattgagtggcctgacccggaaggggcgcta
acgatggtggggccagctacacgggttttcgatggccgcgtagcacttaattaa
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