Hymenobacter nivis: DDQ68_00635
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Entry
DDQ68_00635 CDS
T05498
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
hnv
Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hnv02000
]
DDQ68_00635
Transporters [BR:
hnv02000
]
Other transporters
Pores ion channels [TC:
1
]
DDQ68_00635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
AWM31423
UniProt:
A0A2Z3GDA5
LinkDB
All DBs
Position
complement(136116..139184)
Genome browser
AA seq
1022 aa
AA seq
DB search
MSNNWYKRYNLYEQPAPQRAGQTKPALAKLLAFVLLALLFPLLSQAQTTRAITGKVVDSK
AVGLPGVTVIVSGTTVGASTGADGTFQLQAPSTATTLSFSFIGYATQKVSITDKSSVQVT
MQDDAQALSDVVVVGYGTVKKSDLTGAVSALGPKDFNKGTFTSPDQLIQGRASGVQVTQN
SGEPGGAATIKIRGNSAVTGTGQPLYVVDGVPLDGRSAQPGLNTAFGDSPASNPLNFLNP
NDIESIDVLKDASATAIYGSRAAYGVVIITTKRGKVGEARLDIGASGGVSNILRRIKVLN
ADQYRQALTYYGAPAANDKGQNNDALDAILRTAPIQNYNAAVSGGTENGRYRLSVGYLNQ
QGIVKKTGFEKYNATFSTNLKFLESKRLGLDINVIATQTRSQLAPITNNGDFRGSLIGQA
LQWNPTDSLYGANGQPISRLGSTTINPVAQQDYYNDNSRVTTMLASFSPYYKFTDWLTYR
ALVATTYNTGIRRTSIDQRLNVQDYQQVGYAAIGTSELQTQQMTHTLSADKKIATDLNLN
AVVGYEYQRFENSGSNLSGRGPVNASTGAPIGFGTYGLDYTNYLQFSNPSGRSISSFVDP
VSELQSFFGRAILNYKQRYLFTATLRADGSTKFGDNYKYGYFPSASAAWDISQESFFKSK
SVNLLKARISYGRTGNQEFPAGSARSQFAFQSNNGGINQTTNYNPALKWQSDEQYDAGLD
MAFFNNRLTLTADYFYKRTTDLLYPNIPGYPAAPGGSSVIWQNLPGIITNKGLELLVGVT
AVDNANFGLSFNANGTFVKNNVSGLNQALIIQTGTLNGQGLSGVLAETIQNGQPINGFYL
PIYNGINPTTGFYNDFGPTQYAGNPNPTTLLGLSTSIRYKKLSLTANLNGVFGNKIYNNT
FNSVLNVSQIRGGRNIALAEYESGVKESLANAVTPSTRYLESGNYVKLRNVTLSYALGDI
AGVFKGASVYAIGQNLFVITNYRGFDPEVNTNKSNGVVPSAGIDYTGYPSARTLTFGVNF
SL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaactggtacaaacgttacaatttgtatgagcagcccgctccccaacgggcc
ggtcaaaccaagcccgcgctggcaaagcttctggccttcgtcctgctggccctccttttt
cccctgttaagccaggcacaaactacccgggccatcacgggcaaagtggtcgatagcaaa
gccgtcggcctgccgggggttacggtcatcgtatccggcaccacagtgggagccagcacg
ggggccgacggcacgttccagctccaggcgccctccaccgctaccacattatccttctcg
ttcatcggctacgccacgcagaaggtctcgataacagataaatcttccgtgcaggtgacc
atgcaggacgatgcacaagccctgtccgacgtggtagtggtgggctatggcacagttaag
aagagcgacctgaccggtgccgtatcagctctgggacccaaggatttcaacaagggcacc
ttcacctcgcccgaccaactaattcagggccgggcctcgggcgtgcaagtgacgcagaac
agcggtgagcccggcggggcggccaccatcaagattcgcggtaactcggccgtgacgggt
acgggccagcccctgtatgtagtggacggcgtgccgctcgacggccgctcggcccagccg
ggactgaacacggcctttggcgacagcccggccagcaacccgctcaacttcttgaacccc
aacgatattgagtcaattgatgtgctcaaagatgcctcggctacggccatttatggctcg
cgggcagcctacggggtagtgattattaccaccaagaggggcaaggtgggcgaggcccgg
ctggacataggcgcgtcgggcggcgtttcgaacattctgcgccgcatcaaggtgcttaat
gccgaccaatatcggcaggccctgacgtattacggggccccggctgccaacgacaagggc
cagaacaacgacgcactggatgccattctccgcactgcgcccatccagaactacaacgcg
gccgtgagcggcggcaccgaaaacggccgctaccgcctttcggtgggctatctcaaccag
cagggcatcgtgaagaaaaccggctttgagaagtacaacgccacgttctcaaccaacctg
aagttcctggaaagcaagcgcctggggctggacatcaacgtcattgccacccaaacacgc
tcgcagctggcccccatcaccaacaacggtgacttccggggcagcctcattgggcaagcc
ttacagtggaaccccaccgactcgctctatggggccaacggccagcccatctcgcgcctg
ggcagcaccaccatcaacccggtggcgcagcaagactactacaacgataactcccgcgtg
accaccatgctggcttcgttctcgccctactataaattcaccgactggctaacctaccgg
gcgctggtcgccacgacctataacacgggcatccggcgcacctccatcgaccagcgcctc
aacgtgcaggactaccagcaggtaggctacgccgccatcggcaccagcgagctgcagacg
cagcagatgacccacacgctgagcgcggacaagaagatagccaccgacctgaaccttaac
gcggtggtgggctacgaataccagcggtttgaaaattcgggctcgaacctgagcgggcgc
gggccagtgaacgccagcacgggcgcgcccatcggcttcggcacctacgggctggactat
actaactacctgcaattctccaatccctcaggccgctccatctcgtcgttcgtagatccc
gtgagcgagttgcagtcgttcttcggccgcgccatcctcaactacaagcagcgctaccta
ttcacggctaccctgcgggccgacggcagcaccaagttcggcgacaattataagtacggc
tacttcccctcggcttcggcagcctgggacatcagccaggagagctttttcaagtccaag
tccgtgaatttgctcaaagcgcggattagctacgggcgcaccggcaaccaagagtttccg
gccggctcggcccgcagccagtttgccttccagtccaacaacggcggcatcaaccagact
accaactacaaccccgccctgaagtggcagtcggatgagcagtacgacgcgggtctggac
atggcctttttcaacaaccgcctgacgctgaccgccgactacttctacaagcgcaccacc
gacctgctctaccccaacattccgggctacccggccgcaccgggcggtagcagcgttatc
tggcagaacctgcccggtattattaccaacaagggcctggagctgctggtaggcgtaacg
gcagtggacaacgccaatttcggcctgagcttcaacgccaacggcacgtttgtaaaaaat
aacgtgtcgggcctgaaccaggcgctgattatccagaccggcacgctcaacggccaaggt
ctgtcgggcgtactggccgagaccatacagaatggccagcccatcaatggattttacctg
ccgatttacaacggcatcaaccccaccaccggcttctacaacgattttggcccaacccag
tacgcgggcaatcccaaccccaccacgctgttgggcctgagcaccagtatccgctacaag
aagctctcgctgacggccaacctcaacggagtgttcggcaacaagatttacaacaacacc
ttcaacagcgtgctcaacgtaagccagattcggggggggcgtaacattgccctggccgag
tacgagtcgggcgtgaaggagtcattagccaacgccgtgacgccctcgacgcgctacctg
gaaagcggcaactacgtgaagctgcgcaacgtgacgctttcctacgcgctgggcgacatt
gccggggtattcaagggggccagcgtgtacgccatcggccagaacctattcgttatcacg
aactaccgcggcttcgaccccgaagtgaacaccaacaagtcgaacggagtagtaccctcg
gcgggtattgattacaccggctacccctcggcacggacccttacgttcggcgtcaacttc
tctctctaa
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