Hymenobacter nivis: DDQ68_02760
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Entry
DDQ68_02760 CDS
T05498
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hnv
Hymenobacter nivis
Pathway
hnv03030
DNA replication
hnv03430
Mismatch repair
hnv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DDQ68_02760 (holA)
03430 Mismatch repair
DDQ68_02760 (holA)
03440 Homologous recombination
DDQ68_02760 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hnv03032
]
DDQ68_02760 (holA)
03400 DNA repair and recombination proteins [BR:
hnv03400
]
DDQ68_02760 (holA)
Enzymes [BR:
hnv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DDQ68_02760 (holA)
DNA replication proteins [BR:
hnv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DDQ68_02760 (holA)
DNA repair and recombination proteins [BR:
hnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DDQ68_02760 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
AWM31798
UniProt:
A0A2Z3GG22
LinkDB
All DBs
Position
664186..665295
Genome browser
AA seq
369 aa
AA seq
DB search
MSGLLVHSFTHSRIHPLVQDADAIFKQLRQRQFQPVYFLQGEEPYYIDVVADLIEKMALP
EADRSFNQAVIYGKDVDVAGVLGQAKRFPMMAERTVVIVKEAQTIADLEQERSWPFLEAY
LKNPLASTVLVLCYKHKTLDSRKKLGKLLAGKDAPGAVLMTSKKLYDSQVPAWLTAHVRG
LGQQITGQATALLAEYIGADLSRLANEIDKLVLNLKPGQAIDEELVQRLVGISKEYNIFE
LQKALVQRDVLKANRILGYFAANPKANPLIPNLTLLFGFFSKLLVLHQAGPHPPDGVFKS
LGIVNSFAQKEYQHAMKAYPAARVVDLIHLIRRADAQSKGIESGSMDEGEILRELVWLIL
HAVPAGVVS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggctgcttgttcattcattcactcattcacgcattcacccattggtacaagac
gccgacgccattttcaagcaactgcggcagcggcagtttcagcccgtgtattttttgcag
ggcgaggagccgtactacatcgacgtggtggccgacctgattgagaaaatggccctgccc
gaagccgaccgcagcttcaaccaagccgtgatttacggcaaggacgtggacgtggccggc
gtgctgggccaggccaagcgcttccccatgatggccgagcgcacagtcgtcatcgtgaag
gaagcccagaccatcgctgatttggagcaggagcggagctggccgtttctggaagcctac
ctcaaaaacccgctcgccagcaccgtgctggtgctctgctacaagcacaaaactctcgac
agccgcaagaagctcggtaagctgctggccggcaaagacgcccccggcgcggtgttgatg
acgagcaagaagctctacgatagccaggtgccggcctggctcacggcccacgtgcggggc
ctgggccagcagataaccgggcaggccaccgccttgctggccgagtacattggggccgac
ctgagccggctggccaacgaaatcgacaagctggtgcttaacctcaagcccggccaggcc
atcgacgaagagctggtgcagcggctggtgggcatcagcaaggagtacaacatttttgag
ctgcaaaaggccctggtgcagcgcgacgtactgaaggctaaccgtatcctgggctacttc
gccgccaaccccaaggccaacccgctgatccccaacctcacgctgctcttcggtttcttc
agcaagctgctggtgttgcatcaggcgggcccccacccgcccgacggcgtgttcaaaagc
ctgggcatcgtcaacagctttgcccagaaggagtaccagcacgctatgaaagcctacccc
gcggcgcgggtcgtggacctcatccacctcatccgccgggccgacgcccagagcaagggc
atcgaaagcggcagcatggacgagggcgaaatcctgcgcgagctggtctggttgattttg
cacgccgtaccggccggcgtggtgagttag
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