Hymenobacter nivis: DDQ68_04255
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Entry
DDQ68_04255 CDS
T05498
Name
(GenBank) IGHMBP2 family helicase
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
hnv
Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hnv03009
]
DDQ68_04255
03012 Translation factors [BR:
hnv03012
]
DDQ68_04255
Enzymes [BR:
hnv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DDQ68_04255
5.6.2.5 RNA 5'-3' helicase
DDQ68_04255
Ribosome biogenesis [BR:
hnv03009
]
Eukaryotic type
Other ribosome biogenesis factors
DDQ68_04255
Translation factors [BR:
hnv03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
DDQ68_04255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
Viral_helicase1
UvrD-helicase
DEAD
SLFN-g3_helicase
ResIII
AAA_16
Helicase_RecD
AAA_22
nSTAND3
PIF1
AAA_25
PhoH
HEM4
T2SSE
SMUBP-2_HCS1_1B
Flavi_DEAD
Radial_spoke_3
UvrD_C_2
Fasciclin
AAA_5
AAA
ATPase
DAP3
Herpes_ori_bp
AAA_24
Zot
AAA_7
TsaE
NPHP3_N
cobW
Motif
Other DBs
NCBI-ProteinID:
AWM35295
UniProt:
A0A2Z3GW91
LinkDB
All DBs
Position
983594..985507
Genome browser
AA seq
637 aa
AA seq
DB search
MKLEQQEDLVQFKLKNAKASIQERQQRGLTWYPVTITKEDVGFGGKVVLELERPAGQQGL
HLFQVGKNASLFGNVAGRAATDRPTLSGVITSVRRNKLLLATTKEDLPDWVTEGHKLGID
LTFDEVSYREMDYALGKVMGAYGDRLAELRDILLGARPARFRAEKADDIFYPSPLNDSQQ
AAVRHVLAAQDVAIVHGPPGTGKTTTLVQAILETIRRERRVLVCAPSNTAVDLLTEKLAE
RGVNVIRMGNPSRVSDLLLEHTLDAQVMAHKSYNELRSMRQTAEQYRETAGKHVRNFGWE
EQQQRRMLKEEARALHQAADDLERYITEDLLEQVQVITCTLVGASNRNIRHLTYETVFID
EAAQALEPGCWIPISKAKRVVLAGDHHQLPPTVKSEKAGALRETLFEKAIKRQPAAARML
TVQYRMHEQIMQFSSDQFYDGKLTAYATVRHAGLENYDLRFAPDLPVEFLDTAGFGFTEI
TIPESRSTANPEEADLLLKRLAQLLEPYDPADHEDDLLSIGVIAPYRAQINYLKDAVEEN
DELNGLMTHRMLSIGTVDSFQGQERDIIAISLTRSNNHGEIGFLSDVRRMNVGMTRARRK
LLLVGDSSTLSANPFFKRLLAYIESIGGYRTAWEMQD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggaacagcaggaagacctggtgcagttcaagctcaaaaacgccaaggccagc
attcaggagcgccagcagcggggcctcacctggtacccggtcaccatcaccaaggaagac
gtgggcttcggcggcaaggtggtactggagctggagcgccccgccggccagcagggcctg
cacctgtttcaggtgggcaaaaacgcctcgctgtttggcaacgtggccgggcgcgcggcc
accgaccggcctaccctgagcggcgtgattaccagcgtgcggcgcaacaagctactgctg
gccaccaccaaggaagacctgcccgactgggtgaccgagggccacaagctgggcatcgac
ctcaccttcgacgaggtgagctaccgcgagatggactacgccctgggcaaggtgatgggg
gcctacggcgaccgcctggccgagctgcgcgacatcctgctgggggcccggcccgcccgc
ttccgcgccgagaaagccgacgatattttttaccccagcccgctgaacgattcgcagcaa
gccgccgtgcgccacgtgctggcggcgcaggacgtggccatcgtgcacggcccccctggc
acgggcaaaaccacgacgctggtgcaggccattctggaaaccatccggcgcgaacggcgg
gtgcttgtctgcgcgcccagcaatacggccgtagatttactgaccgaaaagctggccgag
cgcggcgtgaacgtcatccgcatgggcaacccctcgcgggtgtcggacctgctgctcgag
cacacgctcgacgcccaggtaatggcccacaagagctacaacgagctgcgcagtatgcgc
caaacggccgagcaataccgcgaaacggccggcaagcacgtacgcaactttggttgggaa
gagcagcagcagcgccgcatgctgaaggaagaagcccgggccctgcaccaggccgccgac
gatttggagcgctacatcacggaggatttgctggagcaggtgcaggtgattacctgcacg
ctggtgggggcctccaaccgcaacattcgccacctcacctacgagacggtgttcatcgat
gaggccgcccaggccctggaacccggctgctggattcccatcagcaaggccaagcgcgtg
gtactggccggcgaccaccaccagctgccaccaacagtgaaaagcgagaaagccggggcc
ctgcgcgaaacgctgttcgagaaagccatcaagcgccagcccgccgcggcccggatgctg
acggtgcagtaccgcatgcacgagcaaatcatgcagttcagctccgaccagttttacgac
ggcaaactgacggcctacgccaccgtgcgccacgccggcctggagaactacgacctgcgc
ttcgcccccgacctgccggtggaattcctcgacacggccggcttcggcttcaccgaaatc
accatccccgaaagccgctcgacggccaaccccgaggaggccgacttgctactcaagcgc
ttagcccaattgctggagccctacgaccccgccgaccacgaggacgacctgctcagcatc
ggcgtgattgcaccgtaccgcgcccaaatcaattacctgaaggacgcagtggaggaaaac
gacgagctgaacggactcatgactcatcggatgctcagcatcggcaccgtcgattcgttc
cagggccaggagcgcgacatcatcgccatcagcctgacacgcagcaataaccacggcgaa
atcggcttcctgagcgacgtgcgccgcatgaacgtgggcatgacccgcgcccgccgcaag
ctgctgctcgtgggcgactccagcacgctcagcgccaacccgttcttcaaacggctgctg
gcctacatcgaaagcatcggcggctaccgcaccgcttgggaaatgcaggattag
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