KEGG   Hymenobacter nivis: DDQ68_04650
Entry
DDQ68_04650       CDS       T05498                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hnv  Hymenobacter nivis
Pathway
hnv02024  Quorum sensing
hnv03060  Protein export
hnv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hnv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    DDQ68_04650
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DDQ68_04650
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DDQ68_04650
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hnv02044]
    DDQ68_04650
Enzymes [BR:hnv01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     DDQ68_04650
Secretion system [BR:hnv02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   DDQ68_04650
  Eukaryotic Sec-SRP protein
   DDQ68_04650
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 AAA_16 Zeta_toxin CbiA AAA_30 nSTAND3 AAA_17 cobW ParA APS_kinase AAA_31 KTI12 ATP_bind_1 KAP_NTPase DO-GTPase1 AAA_18 ATPase AAA_14 AAA_24 NACHT NTPase_1 AAA_33 AAA_5 ABC_tran NPHP3_N MMR_HSR1 PIF1 SLFN-g3_helicase AAA AAA_19 TsaE
Other DBs
NCBI-ProteinID: AWM32146
UniProt: A0A2Z3GLT3
LinkDB
Position
complement(1081691..1083055)
AA seq 454 aa
MFDNLSTKLDRAIKTLKGQGSISEINVAATIKEIRRALVDADVNYKVAKDVTDKIKDEAM
GRNVLTAVSPGQLMVKIVYDELTALMGGEKQDIVIKGDPAVVLLSGLQGSGKTTFAGKLA
SFIKKQNRTVLLVACDVYRPAAIEQLKVLGEQIGVEVYSEIDNKNPVEISRNAIDYAKKN
NKKVVIVDTAGRLAVDEQMMREIEAVKSAINPSETLFVVDAMTGQDAVNTAKTFNDRLNF
DGVVLTKLDGDSRGGAALSIRAVVEKPIKFISTGEKMEALDLFYPDRMAQRILGMGDVIS
LVERAQQQFDEDEAKRINAKIRKNQFNFDDFLSQLDQIKKMGNIKDLMGMIPGMSKAMKD
VEIDDDAFKPVEAIIKSMTKQERANPDLINGSRKRRLAKGSGTDIQQVNALMKQFEDMRK
MMRTMNKMSQTKGGMAQMAKMMGGLKGGPGGMMR
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgttcgataacctctccactaagctcgaccgggccatcaaaaccctcaagggtcagggt
agcatctccgaaatcaacgttgcggccaccatcaaggaaatccgtcgggccctggtcgat
gccgacgttaactacaaagttgccaaagatgtaaccgataaaatcaaggacgaggccatg
ggccgcaacgtgcttacggccgtctcgccgggccagctcatggtcaaaattgtgtacgac
gagctgaccgcgctcatgggcggcgaaaagcaggacatcgtcatcaagggcgacccggcc
gtggtgctgctttcgggcctgcaaggttcgggcaaaactacgtttgccggcaagctggcc
agcttcatcaagaagcagaaccgcactgtgctgctggtggcctgcgacgtgtatcgcccc
gccgccatcgagcagctgaaggtgctcggcgagcaaattggggtggaggtgtacagcgaa
atcgacaacaagaacccggtcgagatttcgcgcaacgccatcgactacgccaagaaaaac
aacaagaaggtagtcatcgtcgacaccgccggccgcctggccgtcgacgagcagatgatg
cgcgagattgaggccgtcaaaagcgctatcaaccccagcgaaacgctgtttgtggtggac
gccatgaccgggcaggacgccgtgaacaccgccaaaaccttcaacgaccgcctaaatttc
gacggcgtggtgctcaccaagctcgacggcgacagccgcggcggggcggcccttagcatt
cgggccgtggtggagaagcccatcaagtttatctcgacgggcgagaaaatggaagctctc
gacctgttctaccccgaccgcatggcccagcgcatcctgggcatgggcgacgtgatttcg
ctcgtggagcgggcccagcagcagttcgacgaggacgaggccaagcgcatcaacgccaaa
atccgtaagaaccagttcaacttcgacgattttctctcgcagctggaccagatcaagaag
atgggcaacatcaaggacctgatgggcatgattccgggcatgagcaaggccatgaaggac
gtcgaaatcgacgacgacgccttcaagcccgttgaggccatcattaagagcatgaccaag
caggagcgggccaaccccgacctcatcaacggctcgcgcaagcgccgcctggctaagggc
tctggcactgacattcagcaggtaaatgccctaatgaagcagttcgaagacatgcgcaaa
atgatgcgcaccatgaacaagatgagccagaccaagggcggcatggcccaaatggccaag
atgatgggcggcctcaaagggggccccggcggtatgatgcgctag

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