Hymenobacter nivis: DDQ68_05310
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Entry
DDQ68_05310 CDS
T05498
Name
(GenBank) deoxyribonuclease HsdR
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
hnv
Hymenobacter nivis
Pathway
hnv01503
Cationic antimicrobial peptide (CAMP) resistance
hnv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DDQ68_05310
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
DDQ68_05310
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hnv01002
]
DDQ68_05310
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hnv03110
]
DDQ68_05310
Enzymes [BR:
hnv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
DDQ68_05310
Peptidases and inhibitors [BR:
hnv01002
]
Serine peptidases
Family S1: chymotrypsin family
DDQ68_05310
Chaperones and folding catalysts [BR:
hnv03110
]
Other chaperones and cochaperones
DegP / HtrA
DDQ68_05310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
PDZ_2
PDZ
PDZ_6
PDZ_Tricorn
PDZ_1
Myco_protease
GRASP55_65
Motif
Other DBs
NCBI-ProteinID:
AWM32260
UniProt:
A0A2Z3GU96
LinkDB
All DBs
Position
complement(1226711..1228219)
Genome browser
AA seq
502 aa
AA seq
DB search
MRKSTILLLSSGFCLLQLGGVSCNSKKSPDGANTTGRTGTAFSANDTSADDTPSSTAPSS
IGNFVKAAKAATPAVVHIKTTYGAPADGDDSFGPPYGSPSGGRIAMGSGSGVLISSDGYI
ATNNHVVENASKIEVVLPDNRQFSAELIGRDPNTDLALIKIKADHLPSIQLGNSDSVQVG
EWAVAVGYPFSLNTTVTAGIISAKARSIGIINRPSRNGNAEPTGNLGVESFIQTDAAINP
GNSGGALVDTNGKLIGINSAIASQTGSYAGYSFAIPVNLAKKILGDLREYGSVKRGLLGV
SFPSPNAEAQYLQQQGLQPGIVKGVRITGVLSNSAAAAAGLQEGDIIQSIDGMPLNSSAE
FSERIARHRPNDVVKLAYLRDNQVRSTSATLKGEEATATAKSNADLDKIYNKLGASFSPL
PSSLKQQLNLQAGVLVTEVRPGGFFDHIGIPSGTIIAFINGKSIHNPQDIDRALLSAQSG
MIQMLAIAPDGSRVVFDFSLGA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaatcgaccatccttttgctttccagtggcttttgcctccttcagctgggcggt
gttagttgcaacagcaagaaaagcccggacggggcaaatactactggacgcactggaaca
gcattttcagcaaacgacacgtcagccgacgacaccccgagcagcacggctccgtccagt
attggcaactttgtaaaggccgccaaagcggcaacgccggcggtcgtgcacattaaaacc
acctacggtgctcccgcggatggtgatgattcgtttggtccgccgtatggctccccctcc
ggaggccgcatagccatgggttctggctccggagtacttatcagcagcgacggctacatc
gccacgaacaaccacgtggtggaaaatgcctctaaaattgaagtggtcttgcccgacaat
cggcagttttccgcagaactaattggccgtgacccaaataccgacctggcgctaatcaaa
atcaaggccgaccatctgcccagtatccaactcggcaactccgatagtgtgcaggtgggg
gaatgggcggtggcggtggggtatcccttttcgctgaataccaccgtcacggccggcatt
atcagtgccaaagcgcgcagcattgggattatcaaccggcccagccgcaacggcaacgcg
gagcctacgggcaatctgggggtggagtccttcatccagaccgatgcggccattaacccc
ggcaacagcgggggcgccctggttgatacgaatggcaagctgattgggattaactcggcc
attgcctcacagactggcagctacgccggctattcatttgctattcccgtgaatctggcc
aagaagattctgggggatttacgggaatatggctcggtaaaacgcgggctgctgggcgtg
tcctttccatcccccaacgccgaggcgcaatacttacaacaacaagggcttcagccgggc
attgtcaaaggcgttcgcatcaccggggtactcagcaacagcgccgcggccgcggccggc
ctacaggaaggtgatattatccaaagcattgacggcatgccgttgaattcgtccgcggag
ttctccgaaagaattgcccggcaccgccccaatgatgtggtcaagctggcctacttacgt
gacaaccaggtccgctccacctcggctacgctgaaaggagaggaagccacggcgacggcc
aaaagcaatgccgacctggataaaatttataataagctcggagctagcttctccccctta
cccagttcgctgaaacaacagttgaacctacaggccggggtactggtaacggaggtccgg
ccgggtggtttcttcgaccatattggcattcccagcggaaccatcattgccttcatcaat
ggcaaatccattcacaacccccaggatattgatcgtgccttgctctcggcccaaagcggc
atgattcaaatgctggccattgccccggatgggtcacgggtggtgtttgacttttcgctc
ggagcgtaa
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