Hymenobacter nivis: DDQ68_06065
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Entry
DDQ68_06065 CDS
T05498
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hnv
Hymenobacter nivis
Pathway
hnv03030
DNA replication
hnv03430
Mismatch repair
hnv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DDQ68_06065
03430 Mismatch repair
DDQ68_06065
03440 Homologous recombination
DDQ68_06065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hnv03032
]
DDQ68_06065
03400 DNA repair and recombination proteins [BR:
hnv03400
]
DDQ68_06065
Enzymes [BR:
hnv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DDQ68_06065
DNA replication proteins [BR:
hnv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DDQ68_06065
DNA repair and recombination proteins [BR:
hnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DDQ68_06065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AWM32391
UniProt:
A0A2Z3GJD5
LinkDB
All DBs
Position
1401541..1403037
Genome browser
AA seq
498 aa
AA seq
DB search
MYAIVDLETTGGQPAQDRITEIAVYIHDGEKIIGEYATLLNPGRSIPPFITQLTGITNDM
VRDAPKFHEVARKVVEITEGCVFVAHNVRFDYSFLKKEFADLGYNYSRKTLCTVRLSRSL
IPGQPSYSLGKLCQNIGIPLNGRHRAAGDAHATALLFGRLLGITQEGEAGAPGAPTADTL
AQVDALAPAGRRPEGAGAPAKAPSARRVAVVQQAIKTALLPPLVSPEMVAALPQATGVYY
FHNEAGEVIYVGKSINIYKRIQQHFAVDVKSRKSLEFKNSIADITWELTGSELVALLYES
HLIKQLKPAYNRAQRRSVFPAGIYLRVDEQGYKRLLYGRADARNAEIPIIALANQYKAQG
FLYHKVAKYNLCQKLCGLYKTPGACFDYQVHRCLGACVGQEAPEAYNTRVDEAIDSITYE
HQSFVVIGAGRTELEKTIVLVENGRYLGFAYVDETFTARRIGDFRDVIKSYTDNKDTQQI
IRQYLRTKHKGEEVKIFA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgccattgtcgatttagaaaccaccggcggccaacccgcccaggaccgcatcacc
gagattgccgtgtacatccacgacggcgaaaagatcatcggtgagtacgccaccctgctc
aaccccgggcgcagcattccgccgttcatcacccagctcacgggcatcaccaacgacatg
gtgcgcgacgcgcctaagttccacgaggtggcgcgcaaggtggtcgagatcaccgaaggc
tgcgtgttcgtggcccacaacgtgcggttcgactactcgttcttgaagaaagaatttgcc
gacctgggctacaattattcgcgcaaaacgctgtgtactgtgcggctctcgcgcagcctc
attccgggccagcccagctacagcctgggcaagctgtgccagaacatcggcatcccgctg
aacggccgccaccgcgccgccggcgatgcccacgccacggccctgctcttcggccgcctg
ctcggcattacgcaggaaggcgaagccggggcccccggggcccccaccgccgacacgctg
gcccaggtagatgcgctggctcccgccggccgccggcccgagggcgccggggcccctgcc
aaagcgccctcggcacggcgcgtggccgtggtgcagcaggccattaaaacggccctgcta
ccgccgctcgtcagccccgaaatggtggccgcgctacctcaggccacgggcgtgtactac
ttccataacgaggccggcgaggtgatttacgtgggcaagagcatcaatatctacaagcgc
atccagcaacactttgccgtcgatgtgaagtcgcgcaaaagcttggaattcaagaactcc
attgccgacattacctgggagctgaccggctcggagctggtggcgctgctgtatgaatcg
cacctgattaagcagctcaagccagcttacaaccgggcccagcggcgctcggtattcccg
gcgggcatctatttgcgcgtggatgagcagggttacaagcgcctgctctatggccgcgcc
gacgcccgcaacgccgaaattcccatcatcgccctcgccaaccagtacaaggcccagggc
tttctgtaccacaaggtggccaagtacaacctgtgccagaagctgtgcggcctctacaaa
acgcccggcgcctgcttcgattaccaagtgcaccgctgcctgggggcctgcgtgggccag
gaggcgcccgaggcctacaacacccgtgtggacgaggccatcgacagcatcacctacgag
caccagtcgttcgtggtgattggcgcgggccgtaccgaactggaaaaaaccatcgtgctg
gtcgagaacggccgctacctgggcttcgcctacgtggacgaaaccttcacggcccgccgc
atcggcgacttccgcgacgtcattaagtcgtacaccgacaacaaggacacgcaacagatt
atccgccagtacctacgcaccaagcacaagggcgaggaggtgaagatatttgcgtga
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