Hymenobacter nivis: DDQ68_06585
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Entry
DDQ68_06585 CDS
T05498
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hnv
Hymenobacter nivis
Pathway
hnv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DDQ68_06585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hnv02000
]
DDQ68_06585
Transporters [BR:
hnv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DDQ68_06585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
RXLR
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
AWM32482
UniProt:
A0A2Z3GKB3
LinkDB
All DBs
Position
complement(1513645..1514865)
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AA seq
406 aa
AA seq
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MKKTFLLLTTAAALLAGCGSASDKAHTPQQTLAQTWPQIEAKGKNQPVSMLMWMGDPLIN
KYMSTYVKPELKRRYGIELQIAAAQGAGLAQTLAAEQQAGQPSEADVVWINGETFYQLRQ
VDALLGPFVDKLPNARLLDLQNPFINTDFQQPVAGMECPWGNVQFTFIYDSARVAQPPRS
WAELPAFVKAHPGQFTIPNEFTGMTLLKSWMMALSGNPKLFQGKFDEAVYNKWSGELWKQ
VNASRPYFWKQGQTFPEQLAPLHQLFANGEVAFTFSNNDAEVDNKVNQGVFPATARAYVP
RPGTIQNSHYLGIVKGAQHPEAALLAVNFLISPEAQLKKMDPNVWGDHTVLNLAALPAAQ
RRQFEQLPSRRYAPRRAAIQGLALMEPDPEYMTRLFKDFRTQVIEK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacattcctgctcctgacaactgccgccgccctgctcgccgggtgcggctcc
gcgtcggacaaagcgcataccccgcagcagaccctggcccaaacctggccacaaatcgaa
gccaagggcaaaaaccagccggtgagcatgctaatgtggatgggcgatccgctcattaat
aagtacatgagcacctacgtgaagcccgagctgaagcgccgctacggcatcgagctgcaa
attgcggccgcccagggtgcgggcctggcccagacgctggctgccgagcagcaggccggc
cagcccagcgaggccgacgtggtctggattaatggcgagacgttctaccagctccggcag
gtggatgcgctgctcgggccattcgtcgacaaactgcccaacgccaggctgctcgacctg
caaaaccccttcatcaacaccgattttcagcagccggtggcggggatggagtgcccgtgg
ggcaacgtgcagttcacatttatctacgactcggcgcgggtggcgcagccgccccgctcg
tgggccgagctgccagcttttgtgaaggctcaccccggccagttcactatcccgaacgag
tttacgggtatgacactgctgaaatcgtggatgatggccttgtcaggcaaccccaagctg
tttcagggcaagtttgatgaagctgtgtacaacaagtggtcgggcgagctgtggaagcag
gtgaatgccagtcggccctacttctggaagcagggccagaccttccccgagcagctcgcg
ccgctgcaccagctttttgccaacggcgaggtagcctttaccttctccaacaacgacgcc
gaggtcgacaacaaggtgaaccagggcgttttcccggccaccgcccgcgcctatgtgccc
cggcccggcaccatccagaactcccactacctaggcatcgtgaaaggggcccagcacccg
gaagccgccctgctggccgttaatttcctgatttcgcccgaggcccagctcaaaaaaatg
gaccccaacgtgtggggtgaccacaccgtgctgaacctggctgccctgcctgccgcccag
cgccggcagttcgaacagctgccctcccgccgctacgccccccgccgcgcagccatccag
ggcctcgccctgatggagcccgacccagaatacatgacccggctattcaaggatttccgc
acccaggtgattgagaagtag
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