Hymenobacter nivis: DDQ68_09830
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Entry
DDQ68_09830 CDS
T05498
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hnv
Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hnv03032
]
DDQ68_09830
03400 DNA repair and recombination proteins [BR:
hnv03400
]
DDQ68_09830
Enzymes [BR:
hnv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DDQ68_09830
DNA replication proteins [BR:
hnv03032
]
Prokaryotic type
DNA Topoisomerases
DDQ68_09830
DNA repair and recombination proteins [BR:
hnv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DDQ68_09830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AWM33045
UniProt:
A0A2Z3GPX5
LinkDB
All DBs
Position
complement(2216898..2218007)
Genome browser
AA seq
369 aa
AA seq
DB search
MPTAAPAARPKTRKKHLAPTAHELYKDPAQQAAQAGLHYATDAAPGYARKAGRSGKFSYH
DAQGHKVTDAAVLERIAGFVIPPAWTDVWVAQDARAHLQVTGHDTVGRKQYRYHPAWDEI
RSLTKFSRLQAFGEKLPALRQQLQRDLARPALSREQVVALVISLIDQSFIRVGNQEYAKK
NKSYGLTTLHDEHVTFKGDAVRFAFVGKKGVAHDVTLRDRRLARLVRKCQEIPGQHLFQY
YAADGQRHALESGDVNGYLHEHTGLALSAKDFRTWGGTVKMVECLESALTEEPDLAPEKV
IRKAVKDVASGLGNTPTVCSKYYIHPQVVTLFKSGELIDYLRAHDATPAPQDPLSPTERL
VLKMLAAIA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgccgcgcccgccgcccgccccaaaacccgcaagaagcacctcgcgcccacc
gcccacgagctctacaaagatcccgcccagcaggccgcccaggccgggctgcactacgct
accgatgccgcccccggctacgcccgcaaggccggccggagcggtaaattcagctaccac
gatgcccagggccacaaagtgaccgacgccgcggtgcttgagcgcatcgccggtttcgta
attccgccggcctggacggacgtgtgggtagcccaggacgcccgggcccacttgcaggtg
acgggccacgacacggtgggccgcaagcagtaccgctaccacccggcctgggacgaaatc
cgtagcctgaccaagttttcgcgcttgcaagcatttggcgagaagctgcccgctctgcgc
cagcagctccagcgcgacttggcccgcccagcgctgagccgcgagcaggtggtggccctg
gtgatttcgctcatcgaccagtcgtttatccgggtgggtaaccaggaatatgcgaagaag
aataaaagctacggcctcaccacgctgcacgacgagcacgtaacgtttaagggcgacgct
gtgcgcttcgccttcgtgggcaaaaagggcgtggcccacgacgtaacgctgcgcgaccgc
cgcctggcccgcctcgtgcgcaagtgccaggaaattcccggccagcacctgttccaatac
tatgccgccgacggccagcgccacgccctggaatcgggcgatgtgaacggttacctgcac
gagcacaccggcttggccctctcggctaaggacttccgcacttggggcggcaccgtaaaa
atggtggaatgcctcgaaagcgcgctcaccgaagagcccgatttggcccccgaaaaagtt
atccgcaaagccgtgaaggatgtggccagcggcctgggcaacacgcccactgtatgctca
aaatactacatccacccgcaggtggtcacgctcttcaaatcgggcgaactcattgattac
ttgcgcgcccacgacgccacccccgccccccaagacccgctttcgcctaccgagcgccta
gtgctgaaaatgctggccgccatcgcgtaa
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