Hymenobacter nivis: DDQ68_10365
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Entry
DDQ68_10365 CDS
T05498
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hnv
Hymenobacter nivis
Pathway
hnv00541
Biosynthesis of various nucleotide sugars
hnv01100
Metabolic pathways
hnv01250
Biosynthesis of nucleotide sugars
Module
hnv_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DDQ68_10365 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hnv01005
]
DDQ68_10365 (kdsA)
Enzymes [BR:
hnv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
DDQ68_10365 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
hnv01005
]
Lipid A
DDQ68_10365 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
AWM33146
UniProt:
A0A2Z3GPD7
LinkDB
All DBs
Position
complement(2331831..2332691)
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AA seq
286 aa
AA seq
DB search
MLTALANTLPHFRHTQSGQFFLMAGPCVIEGEDMALRIAERIKHLTDKLQIPYIFKGSYR
KANRSRLDSFTGIGDEKALRILQKVGREIGVPTVTDIHESEEAALAAEYVDVLQIPAFLC
RQTDLLIAAAKTGKVVNIKKGQFLSGEAMKFAVDKVQESGNMNVILTERGNSFGYSDLVV
DYRNLPAMQRFGVPVVMDVTHALQKPNQSSGVTGGQPALIEIIAKAAIAVGADGLFIETH
PTPTTALSDGANMLPLDQLEGLLQRLTRLRDAVRPTGEVSAQGLNA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccgccctcgccaacacgcttccgcatttccgccacacccagtcgggccagttt
tttttgatggcggggccctgcgtcatcgaaggcgaagacatggccctgcgcatcgccgag
cgcatcaagcacctcaccgacaagctccagattccgtacattttcaagggctcgtaccgc
aaggccaaccgctcgcggctcgattcctttactggtatcggcgacgaaaaggcgctgcgc
atcctgcaaaaagtggggcgcgaaatcggcgtgcccaccgtgacggacattcacgaatcg
gaggaagcggcactggcggcggagtacgtggacgtgctgcaaatcccggcttttctgtgt
cggcaaactgatttgctcatcgccgcggccaaaaccggtaaggtggtcaacatcaagaaa
ggccagttcctgagcggtgaggctatgaaatttgccgtcgacaaggtgcaggaatcgggc
aacatgaacgtcattctcaccgagcgcggcaattcgtttggctactccgacctagtggtg
gactaccgcaacctgcccgccatgcagcgcttcggcgtgcccgtggtcatggacgtgacc
cacgccctgcaaaagcccaaccagagcagcggcgtgacgggcggccagcccgccctgatt
gaaatcatcgccaaggccgccattgcggtgggcgccgacggcctgttcatcgaaacccac
cccacgcccaccacggccctttcggacggagccaatatgctgcccctcgaccagttggaa
ggcctgctccagcgtctcacgcgcctgcgcgacgccgtacgccccacaggcgaagtgagc
gcccaaggcttgaacgcctag
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