Hymenobacter nivis: DDQ68_10465
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Entry
DDQ68_10465 CDS
T05498
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hnv
Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hnv03016
]
DDQ68_10465 (truB)
Enzymes [BR:
hnv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DDQ68_10465 (truB)
Transfer RNA biogenesis [BR:
hnv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DDQ68_10465 (truB)
Prokaryotic type
DDQ68_10465 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AWM33161
UniProt:
A0A2Z3GLB9
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All DBs
Position
2355174..2356022
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AA seq
282 aa
AA seq
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MKNDFEKANSQQLSADGIEISANSLEEGVVLLFDKPLTWSSFDGVRKLKNALRIRKVGHA
GTLDPLATGLLILCTGKKTKEIDQIQAQEKEYTGTFRLGQTTPSFDLETAVDAEGPYAHL
TDADIQAAAAQFVGEIQQTPPLYSAVKIDGQRAYELARKGQTAEIKAKTVTIKTFELTRI
ALPEVDFRVVCSKGTYIRSLARDLGAALGAGAHLTGLRRTRIGAYRVEDALTLADVQALA
PPRPEGPASEARPRRGGPRPARAGLDFYAAQQAAGAPTEGTE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgactttgaaaaagctaacagccagcagctatcagctgatggcatagaaata
tcagctaacagcttagaagaaggggtcgtcctgctcttcgataaacccctcacctggtcg
tcgttcgacggcgtgcgcaagctgaaaaacgcgctgcgcatccgcaaagtcggccacgcc
ggcaccctcgaccccctggccaccggcctgctcatcctctgcacgggcaagaaaaccaag
gagatcgaccagattcaggcgcaggaaaaggagtacaccggcacctttcgcctcggccaa
accacgcccagcttcgaccttgaaaccgccgtggacgccgagggcccctacgcccacctc
accgacgccgacatccaggccgccgccgcgcagtttgtgggcgaaatccagcaaacgccg
ccgctgtattcggccgtgaagattgacggccagcgcgcctacgagctggcccgcaagggc
cagacggccgaaatcaaggccaagaccgtcaccatcaaaacattcgagctaacgcgcatt
gcgctgcccgaagtggatttccgagtagtatgctcgaaggggacctacattcgcagcctg
gcccgcgacctgggcgctgccctgggcgcgggggcccacctcacggggctgcggcgcacc
cgcatcggcgcgtatcgggtggaggacgccctcacgctggccgacgtgcaggccctggcc
ccgccccgccccgagggccccgccagcgaggcgcgcccccgccgcgggggcccccgcccg
gcccgcgccggcctcgatttttacgccgcccagcaagccgccggggcccctactgaaggg
accgagtag
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