Hymenobacter nivis: DDQ68_10800
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Entry
DDQ68_10800 CDS
T05498
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hnv
Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hnv03016
]
DDQ68_10800
Enzymes [BR:
hnv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DDQ68_10800
Transfer RNA biogenesis [BR:
hnv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DDQ68_10800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AWM33223
UniProt:
A0A2Z3GHM9
LinkDB
All DBs
Position
2442446..2443618
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AA seq
390 aa
AA seq
DB search
MPTIHYLTTADAIAAAATHFATLPRIGIDLEFDDMRYRYGRHLALIQVFDGQEVYLIDPL
PLEPGMAAGLDPLFAVLRDPSVAKVFHSCKSDILLLDEVFGVNCRTIVDTSVQFSLLAAE
DNNISLGRLIQSELGFEVDKGEQKSNWLKRPLTEAQKEYAANDVLYLFELTDRLADRLAD
MGRAQWAAEENQALEAVRYGRDEPRPWARNATKFKITPEEMPVFRELYKLRDTVARQLDR
PPYHVISNDRLAELARQPIETANQLRAANGLHPELKRAPYADQLLAIGTTDLPGEAPLPA
DQRKFPFRRRLNGATANRAEARETLLLTLKAHLAADQGPVMANMVLSNRLIAEVVEQGAA
GALRPWQQQLLKATAEKHGEDYELITAPFA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcccacaatccactacctcaccactgccgacgccattgccgccgcggccacccacttc
gccaccctgccgcgcatcggcatcgacctggagtttgacgacatgcgctaccgctacggc
cggcacctggcgctaatccaagtgttcgacgggcaggaagtatacctcatcgacccgctg
ccgctggagcccggcatggctgccggccttgacccgctgtttgccgtgctgcgcgacccg
tccgtggccaaggtattccactcctgcaagtcggatattctactcctcgacgaggtgttt
ggcgtcaactgccgcaccatcgtcgacaccagcgtgcaattcagcctgctggccgccgaa
gataacaacatctccttgggccgcctcatccaaagcgagctgggctttgaagtggacaag
ggcgagcagaagtcgaactggctgaagcgccccctcaccgaggcccagaaggagtacgcg
gccaacgacgtgctctacctgttcgaactgaccgaccgcctggccgaccgcctcgccgac
atgggccgcgcccagtgggccgccgaggaaaaccaggccctggaagccgtgcgctacggc
cgcgacgagccccgcccctgggcccgcaacgccaccaagttcaagattacgcccgaggaa
atgccggtattccgcgagctgtacaaactccgcgacacggtggcgcggcagctcgaccgc
ccgccctaccacgtcatcagcaacgaccggctggccgagctagcccgccagcccatcgaa
accgctaaccagctgcgcgccgccaacggcctgcaccctgagctgaagcgcgcgccctac
gccgaccagttgctggccatcggcaccaccgacctgcccggcgaggccccgctgcccgcc
gaccagcgcaagttccccttccgccgccgcctgaacggggccaccgccaaccgcgccgaa
gcccgcgaaaccttgctgctgaccctcaaggcccacctcgccgccgaccagggccccgtg
atggccaacatggtcctcagcaaccgcctcatagccgaggtggtggagcagggcgccgcg
ggggccctccgcccctggcagcaacagctgctaaaagctaccgccgaaaagcacggcgaa
gactacgagttgattaccgctccatttgcctga
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