Hymenobacter nivis: DDQ68_12220
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Entry
DDQ68_12220 CDS
T05498
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
hnv
Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hnv03009
]
DDQ68_12220
Enzymes [BR:
hnv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
DDQ68_12220
Ribosome biogenesis [BR:
hnv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DDQ68_12220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AWM33484
UniProt:
A0A2Z3GVN5
LinkDB
All DBs
Position
2765317..2766030
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AA seq
237 aa
AA seq
DB search
MKLPNFADLILFESDDYLVVNKPPFLATLDERVGGAPNMLRMARQHYDDIQAAHRLDRDT
SGALAFAKHPEAYRHLAMQFESREVKKQYHAVVWGTPRLEHQLVDRHIETTTRGKARLAY
KGKEAETYFTTLDTYTRHALVLAEPVTGRMHQIRLHLQYLQAPIVGDGMYGGEDFFLSSL
KKKFNLKEGETEQPFIKRFALHAMRLQFAGLGGEEIAVDAPYPKDFRVLVDVLAQNR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcccgaatttcgccgaccttatcctgtttgaaagcgacgactacctcgttgtc
aacaagccgccctttctggccacgctcgacgagcgggtgggcggggcccccaatatgctg
cgcatggcgcgccagcactacgacgacatccaggccgcccaccgcctcgaccgcgacacc
agcggggccctggcctttgccaagcaccccgaggcctaccgccacctggccatgcagttc
gagagccgggaggtgaaaaagcagtaccacgccgttgtctggggcactccgcgcctggag
caccagctcgtggaccgccacatcgaaaccaccacccgcggcaaggcccgcctcgcctac
aagggcaaggaggccgaaacctacttcactacgctcgacacgtacactcgccacgccctt
gtactggccgagcccgtgaccggccggatgcaccagattcggctgcatttgcagtacctc
caggcccccatcgtgggcgacggcatgtacggcggcgaggattttttcctctcgtcgctc
aagaagaagtttaacctaaaggagggcgaaaccgagcagccgttcatcaagcgctttgcc
ctgcacgccatgcgcctgcaattcgcgggcctcgggggcgaagaaatagcggtggatgcc
ccctaccccaaagacttccgggtgctggtggacgtactggcccagaaccgctag
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