Hymenobacter nivis: DDQ68_14560
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Entry
DDQ68_14560 CDS
T05498
Name
(GenBank) helicase SNF2
Organism
hnv
Hymenobacter nivis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
LAGLIDADG_3
Hom_end
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AWM33905
UniProt:
A0A2Z3GS81
LinkDB
All DBs
Position
complement(3284237..3288250)
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AA seq
1337 aa
AA seq
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MKVSPTEPFQIVYSLFEHEFLGHLFAAYLVQRGPKGQLTLLHQTASARNAPEFASGLDAV
DFELIELCDQLQQEAVIKEFWPRKIAAADFFLKTYNADKGDKALQDAVARYVQTRMAAAL
ARLHGKQVFIMGRDGEPTWREIALAPVPASVLFHFRRNDDGTHYFPTIQYQNQKLDFQYK
GALLVCQQPAWLLLDGVIHSFHNDVDGRKLQPFLSKKFIVVPRQMEASYFQKFVAPLMEA
FDVHARGVGFAVVTDRYRARPRLTFSDVPPAGALPEAPERPPGPPRRGRVPQPKPAPAPS
ADRLYFQLGFRYGDASVPFDPSKRVSVRLEQADDSYTFHRLLRSADDERAAAAVLAARGL
VLADGYAALDRVTAFQWLHDNAESLAAEGFAVEPAAGASQPYFLGPVRVELGIQEAGDWF
DVRGTVYFGDIAVPFIRLRGHILQRRREFRLPNGQVAIIPEAWFTDYLELFAFAEEQDEA
LSLRRHHLALVADLQSNELATVTLGRKLEKLRDFAEVEDHPLPVGFRGELRPYQKAGYNW
LRFVQDYHFGGCLADDMGLGKAQPLHANILTPGGWKQMGEMRVGDAVINSQGTASRVTGV
FPQGEKEIFRVMFTDGATAECCAEHLWAVQSPVQKCRGQGYQVRALHELAGNLYDRHGNT
KWFIPMVKPVAMTTQPVPVEPYFMGLLLGDGCFRQNSVQLSMEDAEIVNYVALGLPPGLA
MRQQGTTCDYRFVKTAAGWTNDLMQQIGALGLKGKGSKDKFIPDAYLFNDAATRLAVLQG
LMDSDGYMPAPGDVCQFTSVSVELIKGVTFLVQSLGGTVKESSKIPTYTHNGARRTGQLA
YALTLSLPPHIQPFRLARKAALYRPKSKYQPCRGIKAVELVGTMPAQCIAVDAPDRLYVT
DNFVLTHNTIQTLAMLQQRAESGAAQGAASLLALPTSLVYNWLSEAQKFTPALRLLVYTG
TYRTKDVAQFAGYDVVLTSYGIVRLDAELLASYRFDYVILDESQAIKNPSSTTSQAVRQL
RSKHRLILTGTPVENSTMDLWSQMSFINPGLLGTQAFFRKEFLKPIEQHRDEGRMRRLHA
LIKPFILRRHKEQVAKELPAKTEQLSYCDMTPEQAQAYEETKSFYRNKILQNLDEHGSAS
TQFLLLQGLTRLRQMANHPHLADATYTHESGKLREVLRMVRNVVAEGHKVLVFSQFVQHL
ALVRAALDERQLPYAYLDGNTRDRAAEVARFQETDALQIFLISLKAGGVGLNLTAADYVF
LLDPWWNPAVEAQAVDRAHRIGQQRPVFVYKFITQHTVEEKILALQQRKLNLVSELIATD
EAVIKTLTRADIEELLG
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatcgcctaccgaaccttttcaaatcgtttactcgctctttgagcacgagttc
ctgggccacctatttgcggcctacctggtgcagcgcgggccgaagggccagctcacgcta
ctgcaccaaacggcttcggcccgcaacgcgcccgagtttgccagtggcctcgacgcggtg
gactttgagctgattgagctctgcgaccagcttcagcaagaagcggttatcaaggaattc
tggccccgcaagattgcggcggccgacttcttcctgaaaacctataacgccgacaagggt
gacaaggcgctgcaagatgccgtggcccgctacgtgcaaacgcgcatggccgccgcgctg
gcccgcttgcatggtaagcaggtgttcatcatggggcgcgacggcgagcccacctggcgc
gaaattgcgctggccccggtgccggcctcggtgctattccacttccgccgtaacgacgac
ggcacgcactactttcccaccattcagtaccaaaatcagaagctggatttccagtacaag
ggggccctgctcgtgtgccagcagccggcctggctgctgctggacggcgtcattcactcg
ttccacaacgacgtggatggccgcaagctccagccgtttctgagcaagaagttcatcgtg
gtgccccggcagatggaggccagctacttccagaagttcgtggccccgctcatggaggcg
ttcgatgtgcacgcccgcggcgtgggctttgccgtcgtcacggaccgctaccgggcccgg
ccgcgcctcaccttcagcgacgtaccgcccgccggggccctgcccgaggcgcccgagagg
ccgccggggcccccgcgccgcggccgcgtgccccagcccaagcccgcgcccgcgcccagc
gccgaccgcctgtacttccagctgggcttccgctacggcgatgcttcggtacccttcgac
cccagcaagcgcgtgagcgtgcgcctggagcaggccgacgacagttataccttccaccgc
ctgctgcgcagcgccgatgacgagcgggccgccgcggccgtactggccgcccgcggcctg
gtactggccgatggctacgctgcccttgaccgggtcacggccttccagtggctgcacgac
aatgcggaatcgctggcggccgagggctttgccgtggagcctgccgccggggccagccag
ccgtatttcctggggcccgtgcgcgtcgagctggggattcaggaagccggcgactggttc
gacgtgcgcggcacggtgtacttcggcgatatcgcggtgccgttcatccggctgcggggg
cacattttgcagcggcggcgcgagttccggctgcccaacggccaagtggccatcatcccc
gaggcgtggtttaccgattacctggagctgttcgccttcgccgaagagcaggacgaagcc
ctgtcgctgcgccgccaccacctcgccctggtggccgacttgcaaagcaacgagctggcc
accgtgacgctgggccgcaagctggagaagctgcgcgactttgccgaagtggaggaccac
ccgctgcccgtgggcttccgcggcgagctgcgcccctaccaaaaggccggctacaactgg
ctgcgcttcgtgcaggactaccatttcggcggctgcctggccgatgatatggggctgggg
aaagcgcagccgctgcacgccaatatcctgacgcccggtggatggaagcaaatgggcgaa
atgcgcgtgggcgacgccgttatcaattcgcagggtacggcctcgcgggtgacgggcgtg
tttccgcagggcgagaaggagattttccgggttatgttcacggatggtgccacggccgag
tgctgcgccgagcacctgtgggctgtgcaaagcccggtgcagaagtgccgcggccagggc
taccaagtacgggccctgcacgagctggccggcaacctatatgaccggcacggtaacacc
aagtggtttattccaatggtgaagcccgtggcgatgaccacgcagccggtgcccgttgag
ccgtattttatgggcctgctgctcggcgatggatgcttccggcaaaacagtgttcagctg
tcgatggaggacgcggaaatcgtgaactacgtggcgctggggctgcccccgggcttagcc
atgcggcagcagggcacgacgtgcgattaccggtttgtgaaaacggccgccggctggacc
aacgacctgatgcagcagatcggggccctggggctgaaaggcaagggctcaaaagacaaa
tttattcccgacgcctacctgttcaacgatgcggccacgcgcctggccgtgctccagggg
ttgatggattcggatggctatatgccggcgccgggcgatgtgtgccagttcacttccgta
tcggtggagctaattaaaggcgtcactttcctggtgcagtccctgggcggcacggtgaaa
gaatcgagcaaaataccgacttacacgcacaacggagcgcggcgcaccgggcagttggct
tacgccctcacgctgagcctgccaccgcacattcagccgttccggctggcgcgcaaggcg
gcgctgtaccggcccaaaagcaaataccagccctgccgtggcatcaaggcggtagaactg
gtgggtacaatgcccgcgcagtgcatcgccgtggatgcccccgaccgcctgtacgtgacg
gataacttcgtgctcacgcacaacacgattcagacgctggccatgctccagcagcgggcc
gaaagtggtgcggcgcagggcgcggcgtcgctgctggccttgcctacttcactggtgtac
aactggttgagcgaggcgcagaaatttacgcccgccttgcgcctgctggtgtacacgggc
acttaccgtaccaaggatgtggcccagtttgccggctacgacgtggtgctgaccagctac
ggcatcgtgcgcctcgacgccgagctgttggccagctaccgcttcgactacgtgattctg
gacgagtcgcaggccattaagaacccgtcgagcaccacctcgcaagctgtgcggcagctg
cgctccaagcaccgcctcatcctcacaggcacgccggtagaaaacagcacgatggacctg
tggtcgcagatgtcgttcatcaatcccggcttgctgggcacgcaggcatttttccggaaa
gaattcctgaagcccattgagcagcaccgcgatgagggccgcatgcgccgcctacacgcg
ctcattaagccatttattctgcgccgccataaggaacaagtagccaaagaattgccggcc
aaaactgagcagctcagttactgcgacatgacgcccgagcaggcccaagcctacgaggaa
accaagagcttctaccgcaataaaatcctgcaaaacctggacgagcacgggtctgccagc
acgcagttcctgctgctccagggcctcacgcgcctgcgccagatggccaaccacccgcac
ctcgccgacgccacctacacccacgagtcgggcaagctgcgcgaggtgctgcgcatggtg
cgcaacgtggtagccgaggggcacaaagtattggtgtttagccagtttgtacagcacctg
gccctggtgcgcgctgccctcgacgagcgccagctgccctacgcctacctcgacggcaac
acccgcgaccgggccgccgaagtggcccgcttccaggaaaccgatgcactgcaaatcttc
ctcatcagcctgaaagccggcggcgtgggcctcaacctcaccgccgccgactacgtgttc
ctgctcgacccgtggtggaaccccgccgtggaggcccaggccgtggaccgggcccaccgc
atcgggcagcagcggccggtattcgtctacaagttcatcacccagcacacggtggaggag
aaaatcctggccttgcaacagcgtaagctcaacctggtcagcgagttgattgctacggat
gaggcggtcatcaaaaccctgacgcgggccgatattgaggagctactggggtag
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