Hymenobacter nivis: DDQ68_15090
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Entry
DDQ68_15090 CDS
T05498
Name
(GenBank) hypothetical protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
hnv
Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hnv01011
]
DDQ68_15090
Enzymes [BR:
hnv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DDQ68_15090
Peptidoglycan biosynthesis and degradation proteins [BR:
hnv01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DDQ68_15090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
RhlB
Motif
Other DBs
NCBI-ProteinID:
AWM33996
UniProt:
A0A2Z3GRL1
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All DBs
Position
complement(3395587..3396447)
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AA seq
286 aa
AA seq
DB search
MLSMQLFRSPASAFVLLLSLLLSLPSSARTKRSARVRRFAHTHMCKHVLEPHAVSANMVL
RGRASWYGKYFQGMKTGSGERYNRFAYTCAHKTLPFNTRLRVTSVLTGHSVVVRVNDRGP
FRHRRIIDLSEKASKELNLQELGATTIVAEVVAPETPLGPTTAPDNLLALCLGDPHPHAP
FTTYTVDPAAAAEAAPVVAAAPVAAPATFEVQVGEFATVADAQSVLAKIQSLDPNVHVEL
ANDLLDGRQRSRVLVGTFGERPQAEAVRRWLLVWGIGGQVREVALR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgctatcgatgcaattatttcgtagtcctgcttctgctttcgttttactcctatcgtta
cttttgagcttgcccagctcggctcgcaccaagcggtcggcccgggtgcggcgctttgcc
cacacccacatgtgcaagcacgtgctggagccccacgcggttagtgccaacatggtgctg
cgcggccgggcctcctggtacggcaaatacttccagggtatgaaaacgggcagtggcgag
cgctacaaccgcttcgcctacacctgcgcccacaaaaccctgcccttcaacacccgcctg
cgggtaaccagcgtgcttaccggccactcggtggtggtgcgcgtgaacgaccggggcccc
ttccgccaccgccgcattatcgacctgagcgaaaaagccagcaaagagctgaacctgcaa
gagctgggcgccaccaccatcgtggccgaagtagtagctcccgaaacccccctgggcccc
accacggcccccgacaacctgctggccctgtgcctgggcgacccgcacccccacgcccca
ttcacgacctacaccgtggaccccgccgctgctgccgaagcggccccggtggtagccgcc
gcgccggtagccgcgccggctacgtttgaagtgcaagtgggcgagtttgccacggtggct
gatgcgcaatcagtgctggctaaaattcagtccctcgaccccaacgtgcacgtggaactg
gccaacgacttgctcgacggccgccagcgcagccgcgtgctcgtgggcacgtttggcgag
cggccccaggccgaggccgtacgccgctggctgctcgtctggggcattggcgggcaagtg
cgcgaagtggcgctgcgctaa
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