Hymenobacter nivis: DDQ68_15465
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Entry
DDQ68_15465 CDS
T05498
Name
(GenBank) pseudouridylate synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hnv
Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hnv03009
]
DDQ68_15465
Enzymes [BR:
hnv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DDQ68_15465
Ribosome biogenesis [BR:
hnv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DDQ68_15465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
AWM35447
UniProt:
A0A2Z3GUY6
LinkDB
All DBs
Position
3492899..3494173
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AA seq
424 aa
AA seq
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MRAARPFEANPPQPREERGDDRSGRNDRPDRSDRNVGGDRDGSRDRGFGGARGGEGGFER
KFTPGAFGRRDGAPGAPRINGERPGGFEKRSFGGERDAVRVGSARPDGDERPALGKFAQR
REDLKAQERSVRRSGTGYGTAIQTNRADKPGFGERPGEAPDYKNLKHYDADPNRGNKRRR
DQENQDFGTDELRLNRYIANAGICSRREADALIASGEIRVNGEVVTEMGYKVQPTDTVQY
GKTNLNREKSVYVLLNKPKDFLTTTDDPEGRRTVMELVANASKERIFPVGRLDRNTTGLL
LFTNDGEVAQRLSHPSHKNKKIYQVELSTPLTEDDLRKIGEGIELEDGKAEVDDVAVVAG
NPHFVGIEIHIGRNRIVRRIFEHLGYDVVALDRVQYAGLTKKELPRGKWRFLSEQEVIRL
KYFM
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atccgggcggcgcggccgtttgaagccaacccgccgcagccccgcgaggagcgcggcgac
gaccgtagcggacgcaatgaccgccccgaccgcagtgaccgcaacgttggcggcgaccgt
gacggcagccgcgaccggggtttcgggggcgcgcgcggcggcgaaggtggcttcgagcgc
aagttcacgccgggcgcgtttggccggcgcgacggggccccgggggccccgcgtatcaac
ggcgagcggccgggcggctttgagaagcggagctttggcggcgagcgcgacgcggtgcgc
gtcggcagtgcccggcccgacggggacgagcgcccggccctgggcaaatttgcgcagcgc
cgcgaggacctgaaggcccaggagcgcagcgtgcgccgctcgggcaccggctacggcacc
gccattcaaaccaaccgcgccgacaagcccggctttggcgagcggcccggtgaagccccc
gactacaaaaacctcaagcactacgatgccgaccccaaccgtggcaacaagcgccgccgc
gaccaggaaaaccaggactttggtaccgacgagctgcgccttaaccgctacatcgccaac
gccggcatttgctcgcgccgcgaagccgacgcgctgattgcctccggcgaaatccgggtg
aacggcgaagtggtgacggaaatgggctacaaagtgcagcccaccgacacggtgcagtac
ggcaaaaccaatctcaaccgcgagaagtcggtgtacgtgctgctgaacaagcccaaggat
ttcctcaccaccaccgacgaccccgaaggccgccgcacggtgatggagctagtggccaac
gcctcgaaggagcgcatcttcccggtgggccgcctcgaccgcaacaccactggcctgctg
ctcttcactaacgacggcgaggtggcccagcgcctctcgcacccctcgcataagaacaag
aaaatctaccaggtggagctgagcacgccgctcaccgaggacgacctgcgcaagattggc
gaaggcattgagctggaggacggcaaggccgaggtggacgacgtggccgtggtagcgggc
aacccgcacttcgtgggcatcgaaatccacatcgggcgcaaccgcatcgtgcgccgtatt
ttcgagcacctgggctacgacgtggtggccctggaccgcgtgcagtacgccggcctcacc
aagaaggagctgccccgcggcaagtggcgcttcctgagcgagcaagaggtaattcggctg
aagtacttcatgtaa
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