Hymenobacter nivis: DDQ68_16245
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Entry
DDQ68_16245 CDS
T05498
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hnv
Hymenobacter nivis
Pathway
hnv00730
Thiamine metabolism
hnv01100
Metabolic pathways
hnv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DDQ68_16245
Enzymes [BR:
hnv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
DDQ68_16245
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AWM34199
UniProt:
A0A2Z3GJ67
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All DBs
Position
3664369..3666246
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AA seq
625 aa
AA seq
DB search
MKKKDQAPQHMLVARQPLTGSRKVYVPGTLHPQMRVAMREIALADTERKFDFGFPSESNP
PVTVYDTSGPYTDPDIEIDLKKGLPRLREEWIRERGDVEQLPGTTSDYGQQRAADNGLDH
LRFEHIAAPLRAKAGANVSQMHYAKQGLITPEMEYIAIRENQRFDELPADDPLRAQHRGH
SFGARTPQGPITPEFVRQEVAAGRAVIPANINHPESEPMIIGRNFLVKINTNIGNSAITS
SIEEEVDKAVWSCRWGGDTLMDLSTGKNIHETREWIIRNCPVPVGTVPLYQALEKVNGKA
EDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGAIMAKWCLAHH
QESFLYTHFEEICEIMKAYDVAFSLGDGLRPGSIADANDEAQFAELETLGELTKIAWAHD
VQVMIEGPGHVPMHLIKENMDKQLKECHEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGW
FGTAMLCYVTPKEHLGLPNKQDVKDGVIAYKIAAHAADLAKGHPGAQYRDNALSKARFEF
RWEDQFNLSLDPDTARDYHDETLPAEGAKVAHFCSMCGPHFCSMKITQEVRDYAAKQDLT
ANEVLARGMVEKSREFVAKGSELYL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaagaccaagctccccagcacatgctggtggcgcgccagcccctcaccggc
tcgcgcaaagtgtacgtgcccggcacgctgcacccgcaaatgcgcgtggcgatgcgcgaa
attgcgctggccgataccgagcgcaagttcgattttggcttcccgtcggagtcgaacccg
cccgtgacggtgtacgacaccagcggaccctacacggacccggatattgaaattgacctg
aaaaaaggcctgccccgcctgcgcgaggaatggatccgggagcgcggcgatgtggagcag
ctgcccggcaccacctccgattacggccagcagcgcgccgccgataatggcctggaccac
ttgcgcttcgagcacattgcggccccgctgcgcgccaaagcgggggccaatgtgagccaa
atgcactacgccaagcagggcctcatcacgcccgagatggagtacatcgccattcgcgaa
aaccagcgcttcgacgagctgccggccgacgacccgctgcgcgcccagcaccgtggccac
agcttcggggcgcgtacgccgcagggccccatcacgcccgagtttgtgcgccaggaggtg
gccgccgggcgggccgttattcccgccaacatcaaccacccggagagcgagccgatgatt
atcgggcgcaatttcctggtgaaaattaacaccaatattggtaactcagctatcacgtca
tccattgaggaagaggtagataaggccgtgtggagctgccgttggggcggcgatacgctg
atggacctgagcacgggtaagaacatccacgaaacccgcgagtggattatccgcaactgc
ccggtgccggtgggcacggtgcccctctaccaagccctggaaaaggtgaacggcaaggcc
gaagacctcacttgggagctgttccgcgacacgcttatcgagcaggccgagcagggcgtg
gactacttcaccatccacgccggtgtgctgctgcgctacgtgccgatgaccgccaagcgc
gtgaccggcatcgtgtcgcgcggtggcgccattatggccaaatggtgcctggcgcaccac
caggagagcttcctctacacgcacttcgaagaaatttgcgagattatgaaggcctacgac
gtggccttttcgctgggcgacggcctgcgccccggctccatcgccgatgccaacgacgag
gctcagttcgccgagctggaaacgctgggcgaactcaccaaaattgcctgggcgcacgac
gtgcaggtgatgattgagggccccggccacgtgcccatgcacctcatcaaggagaacatg
gacaagcagttgaaggaatgccacgaggcgcccttctacacgctggggcccctaacgacg
gatattgccccgggctacgaccacatcacgtcggccatcggcgcggccatgattgggtgg
tttggcacggccatgctctgctacgtgacgcccaaggagcacctcggcctgcccaacaag
caggacgtgaaggacggcgtaatcgcctataagatagccgcccacgccgccgacctcgcc
aagggccacccgggggcccagtaccgcgacaacgccctgagcaaggcccgcttcgagttt
cggtgggaagaccagttcaacctctcgctcgaccccgataccgcccgcgactaccacgac
gaaaccctgcccgccgaaggggccaaagtcgcgcatttctgctcgatgtgcggcccccac
ttctgctccatgaaaataacgcaggaggtgcgcgactacgccgcaaagcaggacctcacg
gccaacgaggtgctggctcggggcatggtagaaaagtcgcgggaattcgtggcgaagggc
agcgagctttatctgtaa
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