Hymenobacter nivis: DDQ68_18345
Help
Entry
DDQ68_18345 CDS
T05498
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hnv
Hymenobacter nivis
Pathway
hnv00061
Fatty acid biosynthesis
hnv00071
Fatty acid degradation
hnv01100
Metabolic pathways
hnv01212
Fatty acid metabolism
hnv02024
Quorum sensing
hnv04146
Peroxisome
Module
hnv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DDQ68_18345
00071 Fatty acid degradation
DDQ68_18345
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DDQ68_18345
09145 Cellular community - prokaryotes
02024 Quorum sensing
DDQ68_18345
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hnv01004
]
DDQ68_18345
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hnv04147
]
DDQ68_18345
Enzymes [BR:
hnv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DDQ68_18345
Lipid biosynthesis proteins [BR:
hnv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DDQ68_18345
Exosome [BR:
hnv04147
]
Exosomal proteins
Exosomal proteins of breast milk
DDQ68_18345
Exosomal proteins of breast cancer cells
DDQ68_18345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Ish1
Motif
Other DBs
NCBI-ProteinID:
AWM34570
UniProt:
A0A2Z3H0P8
LinkDB
All DBs
Position
4128582..4130342
Genome browser
AA seq
586 aa
AA seq
DB search
MDVRRSFDILPYQLAEFAKTDALAAKINGQWSPLSTQQVQNQANLVSLGLRALGLQRGDK
VALISMNRPEWLLADFGIAQIGAISVPMYPSITVEDYKYIFTDAGVKAVFVSDAKLFHKV
QEATAGLAIPAENVFTFDKVDGARHFSELLALGQQGNPADLEPLKAAVEPDDLLTLIYTS
GTTGQPKGVMLSHDNLLSNCRNSKQFVPVGPQDKALSFLPLCHIFERMVTYIYMMSGVSI
YYAESLETVAENLREVKPEIFTTVPRLLEKVFDRIVSKGHEQTGLKHKLFFWALNLGLKY
DTQKDQGFVYNTELAVANKLIFSKWREALGGNLRCIVSGGGALQPRLARVFWAAGIRVME
GYGLTETSPVIAVNGYERENNMIGTVGPLINNMEVKIAPDGEILTRSASVMKGYYNKPEL
TAETIDADGWLHTGDIGELINGRFLKITDRKKEMFKTSGGKYIAPQVIEGKLKEEPLIEQ
AMVVGANKKYAAALVIPSFPDLKAWCKRHGVSDASNEELVRNERVVKLYNGLVANCNKSF
AQWEQVKKIALLPELWTVETGEMTPTMKVKRKVITEKNKDLIEGLF
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccgccgctctttcgatatcctaccctaccaactcgccgagtttgccaaaacc
gacgcgctggccgccaaaatcaacggccagtggtcgcccctcagcacccagcaggtgcag
aaccaggccaacctggtgagcctcggcctgcgggccctgggcttgcagcgcggcgataaa
gtggcgctcatcagcatgaaccggcccgagtggctgctggccgacttcggcatcgcccaa
atcggggccatcagcgtgcccatgtaccccagtattacggtcgaagactacaaatacatc
ttcaccgatgctggcgtaaaggccgtgtttgtgtccgacgccaagctgttccacaaagtg
caggaggctaccgcaggcctggccatcccggccgaaaacgtgttcacttttgataaggtc
gacggggcccgccacttcagcgagctgctggcgctaggccagcaaggtaaccccgccgac
ctggagcctctgaaagccgccgtggagcccgacgacctgctcacgctcatctacaccagc
ggcaccaccggccagcccaaaggcgtgatgctgagccacgacaatctcctgagcaactgt
cgcaattccaagcagtttgtgcccgtagggccccaggataaggcgctgagctttctgccg
ttgtgccacattttcgagcgcatggttacgtacatctacatgatgagcggcgtgagcatc
tactacgccgaaagcctggaaaccgtggccgaaaacctgcgcgaagtgaagcccgaaatc
ttcaccaccgtgccgcgcctgctcgaaaaggtgttcgaccgcatcgtgtccaagggccac
gagcaaaccggcctcaagcacaagcttttcttttgggccctgaacctgggcctgaaatac
gatacccagaaagaccagggcttcgtgtacaacaccgagctggcagtagccaataagctc
atattcagcaagtggcgcgaggcgctgggcggtaacctgcgctgcattgtgagcggcggc
ggggccctgcaaccacggctggcgcgggtgttctgggccgctggcatccgcgtaatggag
ggctacggcctcaccgaaacctcgcccgtgattgccgtgaacggctacgagcgcgagaac
aacatgatcggcaccgtggggcccctcatcaacaacatggaggtgaaaattgcgcccgac
ggcgaaatcctgacccgctcggcctccgtgatgaagggctactacaacaagcccgagctc
acggccgaaaccatcgacgccgacggctggctgcacaccggcgacattggtgaattaata
aacgggcggtttttgaagattaccgaccgcaaaaaggagatgttcaaaaccagtggcggc
aagtacatcgccccgcaagtcattgagggcaagctcaaagaagagccgctcatcgagcag
gcgatggtggtgggggccaataaaaagtatgccgccgcgctggtcattccctcattcccc
gacctgaaggcctggtgcaagcgccatggcgtctccgacgcttccaacgaagaattggtg
cggaacgaacgagtggtgaagctttacaacgggctggttgctaattgcaacaagagcttc
gcgcagtgggagcaagtgaaaaaaattgcgctgctgcccgagctgtggaccgtggaaacc
ggcgaaatgacgcccaccatgaaggtgaagcgtaaggtcatcaccgaaaaaaacaaggac
ctcatcgaggggctattttag
DBGET
integrated database retrieval system
