Hymenobacter nivis: DDQ68_18400
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Entry
DDQ68_18400 CDS
T05498
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
hnv
Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hnv03032
]
DDQ68_18400
03036 Chromosome and associated proteins [BR:
hnv03036
]
DDQ68_18400
03400 DNA repair and recombination proteins [BR:
hnv03400
]
DDQ68_18400
DNA replication proteins [BR:
hnv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DDQ68_18400
Chromosome and associated proteins [BR:
hnv03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DDQ68_18400
DNA repair and recombination proteins [BR:
hnv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DDQ68_18400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
Hs1pro-1_C
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AWM35495
UniProt:
A0A2Z3GX28
LinkDB
All DBs
Position
4144173..4144481
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AA seq
102 aa
AA seq
DB search
MTKAEVIAEISQKTGIEKADVLMTVEAFFKVVKDSMTEGNNIYVRGFGSFVNKKRARKVA
RNISKNTSLIIEEHYIPSFKPSKTFVAKIKNSKKVKATAAKA
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaagcagaggtaatcgccgaaatttcgcagaaaaccggcatcgagaaagcagat
gtattgatgactgtagaagccttcttcaaagtggtgaaggattcgatgaccgagggcaac
aacatctacgtgcgcggcttcggttctttcgttaacaagaagcgcgcccgtaaagtggcc
cgcaatatttcgaaaaacacgtcgctcatcattgaggagcactacatcccgagcttcaag
ccgtcgaaaaccttcgtggctaaaattaaaaatagcaagaaagtaaaagccacggctgcc
aaagcttag
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