Hymenobacter nivis: DDQ68_18410
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Entry
DDQ68_18410 CDS
T05498
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
hnv
Hymenobacter nivis
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hnv03019
]
DDQ68_18410
03009 Ribosome biogenesis [BR:
hnv03009
]
DDQ68_18410
Messenger RNA biogenesis [BR:
hnv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DDQ68_18410
Ribosome biogenesis [BR:
hnv03009
]
Prokaryotic type
rRNA processing factors
DDQ68_18410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
AWM34580
UniProt:
A0A2Z3H0R0
LinkDB
All DBs
Position
4145842..4147449
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AA seq
535 aa
AA seq
DB search
MSNELVINSTQEGERIALLQDKRLIEYHFDRNDTNYSVGDIFLGTVKKVMPGLNAAFVDI
GYEKDAFLHYGDLGEQYPSFTKWARTVQSGRTAAASLDQFTFEPPLEKVGKADSVFKKGQ
QIVVQVIKEPISTKGPRVSTDISMAGRYLVLMPFSNTISVSKKIVSKAERDRLKRLIASI
KPENFGVIIRTVAEGRDVAELDKDMQDMVGKWEQLYTTLRTAKPNDKVLGELGRTSSMLR
DMLNESFDSILVDAPAMYEEMRDYLQKIAPDKLGLLKLHNTKVKIFEQTGIEKQLKTLFG
KTVTVPGGGYLVIEHTEALHVIDVNSGSKSNQENDQEATALMINLLAAKEVARQLRLRDM
GGIIVVDFIDMRAAESRKKVEDAVRDVMKADKAKFTVLPLTKFGLLQITRQRVRPAETII
TGEVCPTCGGTGRISASIQVTDDIDNSIDDLLVAQNQSGLTLSVHPFLYAYYTKGLVSRQ
MKWYLKYYKWVKLVKDSSLGLTDYRIEDERGEEIQLRSMAAAMSKVQDREIEFTD
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaatgaattagtaattaattctactcaggaaggcgaacggattgcgctgttgcag
gataagcggctcattgagtaccacttcgaccgcaacgacaccaattattcggtgggcgat
atcttcctgggcacggtgaaaaaggtgatgcccggcctcaacgcggctttcgtggacatt
ggctacgaaaaggacgcgtttctgcactatggcgacttgggcgagcaatacccctcgttc
acaaagtgggcgcggaccgtgcaaagcggccggaccgccgctgccagtctcgatcagttc
acgtttgagccgcccctcgaaaaagtgggcaaggccgatagtgtgttcaaaaaaggccag
caaattgtggtgcaggtcatcaaggagcccatctccacgaaggggccccgggtgagcacc
gacatttcgatggcgggccgttacctcgtgctgatgccgttttcgaacacgatcagcgtg
agcaagaaaattgtgagcaaagcggagcgcgaccggctcaagcgcctcatcgctagcatt
aagcccgaaaattttggcgtcatcatccgcaccgtggcggaagggcgcgatgtggccgag
ctggataaggacatgcaggacatggtgggcaagtgggagcagctttacaccacgctgcgc
accgctaagcccaatgacaaggtgctgggcgagctgggtcgtacgtcgtcgatgctgcgc
gatatgctcaacgagtcgttcgacagcattttggtcgatgccccggccatgtacgaggag
atgcgcgactacttgcagaagattgcgcccgataagctcgggttgctgaagctgcacaac
actaaggtcaagatttttgagcaaacgggcattgagaagcagcttaaaacgctgtttggc
aagactgtaaccgtgcccggtggcggctacctcgttatcgagcataccgaagccctgcac
gtcatcgacgtgaactcgggcagcaaaagcaaccaggagaacgatcaggaagctacggct
ttgatgattaacctgctggcggccaaggaagtagcgcggcagctgcgcctgcgtgacatg
ggcggaattattgtagtagacttcattgacatgcgcgccgccgaaagccgcaaaaaggtg
gaagatgccgtgcgcgacgtgatgaaagccgacaaggccaagttcacggtactgcccttg
accaagttcgggctgctgcaaatcacgcggcagcgcgtgcggccggctgaaaccattata
accggcgaggtgtgccccacctgcggcggtacgggccgtatttcggcctccatccaggta
acggatgatatcgacaacagcatcgacgacttgctggtggcccagaaccagtcgggcctc
acgctgtcggtgcaccccttcttgtacgcctattataccaaaggcttggtttcgcgccag
atgaagtggtatctgaaatactacaagtgggtgaaattggtgaaagacagtagcctgggc
ctcaccgattaccggattgaggacgagcgcggtgaggaaatccagcttcgctcaatggcc
gcggccatgagcaaggtgcaagaccgggaaattgaatttaccgactag
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