Hymenobacter nivis: DDQ68_18600
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Entry
DDQ68_18600 CDS
T05498
Name
(GenBank) antibiotic ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hnv
Hymenobacter nivis
Pathway
hnv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DDQ68_18600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hnv02000
]
DDQ68_18600
Enzymes [BR:
hnv01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DDQ68_18600
Transporters [BR:
hnv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DDQ68_18600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_30
nSTAND3
DEAD
Zeta_toxin
AAA_29
ABC_membrane_2
ScmC
RsgA_GTPase
DUF3619
nSTAND1
DUF2551
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AWM34614
UniProt:
A0A2Z3GZ02
LinkDB
All DBs
Position
complement(4187395..4189239)
Genome browser
AA seq
614 aa
AA seq
DB search
MKTYLRILQYARPWLAFLPQYLLYTVLTIFFSIGNFTLIIPLLSVLFDKTDKMPAQAPAH
LPVFKPTIDWVTQTFNYFFADVLAAYGKMGALAFVCGIVVASVLLSNVFRYLSLRLLAKV
RARVILNLRRDLYYRVVGLQLSFFSSERKGDLMSRFTADVQEVETSVVNTMTAVIKEPLT
IVAYFLVLFHISAPLTLFTLVLLPVSGGIIASIAKRLRRQAEISQSTLGSMMSVIDETLG
GIRVIKAFNAQGYIKDKFDEQNNRYASTSRRIDNTRDLASPFSEFAGVSVVAGLLYFGGS
LILGGNTTLTGEVFIGYVILFSQVLTPAKALSGSFGNIQRGLVAGERVLRIIDTEPTVRD
RPGALVLPPFAHEIELRDVQFSYGDTPVLYDLNLTIKKGQMVALVGPSGGGKSTVADLLP
RFYDASGGQIFIDGHDVRACTIHSVRDQMGIVTQESILFNDTIFNNIRFNTEATEAEVIE
AAKIANAHEFIVASPDGYQTMIGDRGGRLSGGQRQRLSIARAILRNPPILILDEATSALD
TESEKLVQEALQRLMAARTSLVIAHRLSTVQHADEIIVLQHGRIVERGTHNELLRRPGGV
YQRLSSLQTNAALV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgtacctccgcatcctgcaatacgcccggccttggcttgcatttttaccccaa
tacctgttgtacacggtgctgaccatctttttcagcatcggtaacttcacgctgatcatt
ccgttgctcagcgttttgttcgataaaacggacaagatgcccgcgcaggccccggcccac
ctgcccgtcttcaagcccaccatcgattgggtgacgcagaccttcaattatttctttgcc
gatgtattggcggcgtatggcaagatgggggccctggcctttgtgtgcgggatagtagtg
gcctcggtgctactgagcaacgtgtttcgctaccttagcctgcggcttttagccaaggtg
cgggcccgcgttattctcaacctgcggcgcgacttgtactaccgcgtggtggggctgcaa
ctgagctttttttcgagtgagcgcaaaggggatttgatgtcgcgcttcacggccgatgtg
caggaagtagaaacttcggtagtgaataccatgacggcggttatcaaagagcccctcacc
atcgtggcgtattttctggtgctgtttcacatttcggccccactcaccttgttcacgctg
gtgctcctgcccgtatcgggcggcatcattgccagcatcgccaagcggctgcggcggcag
gccgaaatcagccagagcacgctgggctccatgatgtcggtgattgacgagacgctgggc
ggcatccgggttatcaaagcgttcaatgcccagggctacatcaaagacaagtttgatgag
caaaacaaccgttatgccagcacctcgcggcgcattgacaacacccgcgacctagcctcg
ccgttctctgaattcgccggcgtgtcggtggtggcggggctgctgtacttcggcggctcg
ctcattttgggcggcaacaccacgctaaccggtgaggtgttcatcggctacgtcatccta
ttttcgcaggtgctcacgccagccaaggcgctgtcgggctcatttggcaacatccagcgc
gggctggtggccggcgagcgggtactgcgcatcatcgataccgagccgacggtgcgcgac
cggccgggggccctggtgctcccgcccttcgcgcacgaaattgagctgcgcgacgtgcag
ttcagctacggcgacacgccggtgctctacgacctgaacctgactattaagaaaggccag
atggtggccctggtgggccccagcggcggcggtaagagcacggtggccgacctgctgccg
cgcttctacgacgccagcggcggccagattttcatcgacgggcacgacgtacgcgcctgc
accatccactcggtgcgcgaccagatgggcatcgtcacgcaggaaagcatcttgttcaac
gacacgattttcaacaacatccgctttaacacagaggccacggaggccgaagtcatcgaa
gccgccaaaatcgccaacgcccacgagttcatcgtggccagccccgacggctaccaaacc
atgattggcgaccgcggcggccgcctctcgggcgggcagcggcagcgcctgagcatcgcc
cgcgccattttgcgtaacccgccgattctgattttggacgaagccacctcggcgctcgat
accgagagcgaaaagctggtgcaggaggccctgcaacgcctgatggcagcgcgcacctcg
ctcgtcattgcccaccgcctgagcacggtgcagcacgccgacgaaatcatcgtgcttcag
cacggccgcattgtggagcgtggcacccacaacgagctgctgcgccggcctggcggtgtg
taccagcgccttagctcgctacaaaccaacgccgcgctggtgtag
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