Hymenobacter nivis: DDQ68_19400
Help
Entry
DDQ68_19400 CDS
T05498
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hnv
Hymenobacter nivis
Pathway
hnv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DDQ68_19400 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hnv03019
]
DDQ68_19400 (rny)
Messenger RNA biogenesis [BR:
hnv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DDQ68_19400 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF4954
NttC
KH_2
Motif
Other DBs
NCBI-ProteinID:
AWM35512
UniProt:
A0A2Z3GTW8
LinkDB
All DBs
Position
4366077..4367744
Genome browser
AA seq
555 aa
AA seq
DB search
MSTILLYCLLAAVVALVAGIVVGRQLAGKARQDLEGQAQVRAQQLLQEAEEKGNRIRDER
IQQSKDKNRQQRNDFEQESRRLKAELEAELTQRRQGVMEQEQGIKKLTETTQKQLEQLQR
KEKELEGAREKNQADTQQLRDKIEDQNEKRRATHEATLAELKQKEEEADNQLQTVQRQLE
TVANLTAAEAREQLVESLKNEAQLQASSFIKDTVAQAKLTATKDAKKIVLETIQRTASEH
AIENCVSVFNIESDDIKGKIIGREGRNIRALEAATGVEVIVDDTPEAIIISGFDPVRREI
ARLSLHLLVKDGRIHPARVEEIVAKTTKKIEEEIIEIGEKTVIDLGIHGLHPELVRMVGR
MRFRSSYGQNLLQHSREVANLCATMAAEMGLDVKKAKRAGLLHDIGKVSSEEPELPHAIL
GMEMAKKYKEHPDVVNAIGAHHDEIEMTAMISPLVQACDAISGSRPGARREMMESYIKRL
KQLEETAGAFKGVNQCFAIQAGRELRVMVDAENVTDERAAELSFEISQKIEKEMQYPGQI
KITVIREMRSVAYAK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccatattattatactgtctgttggccgctgtggtcgcccttgtggcgggcata
gtggtgggccggcagctggccggcaaagcccggcaagaccttgagggccaggcgcaagtg
cgggcccagcaattgctccaggaagccgaagaaaaaggcaaccgcatccgcgacgagcgt
attcagcagtcgaaggacaagaaccgccagcagcgtaacgattttgagcaggaaagccgc
cgcctcaaagccgagctggaagccgagctgacccagcgtcgccagggtgtgatggagcag
gagcagggcatcaagaagctcaccgaaaccacgcagaagcagcttgagcagctgcaacgc
aaggagaaggagttggaaggggcccgcgagaaaaaccaggccgacacccagcagctgcgc
gacaagattgaggaccagaacgagaagcgccgcgctacccacgaagccacgctggccgag
ctgaagcagaaggaggaagaggctgataaccagcttcagaccgtgcagcgccaactcgaa
accgtagccaacctcaccgccgccgaggcccgcgagcagctcgtggaatcgctcaaaaac
gaggcccagctgcaagccagctccttcataaaggacaccgtggcgcaggccaagctgacg
gccaccaaggacgcgaagaagatcgtactggaaaccatccagcgtaccgcctcggagcat
gctattgagaactgcgtgtcggtgttcaacattgagagcgacgatattaagggcaaaatt
atcggccgcgaggggcgcaacattagggccctggaagcggccacgggcgtggaagtgatt
gtggacgacaccccggaagccatcatcatctcgggcttcgatccggtgcgccgcgaaatt
gcccgcctctcgctgcacttgctcgtgaaggacggccgtattcaccccgcccgggtggag
gaaatcgtggcgaaaacgaccaagaaaatcgaggaggaaatcatcgagattggcgagaaa
accgtcatcgaccttggcattcacggcttgcaccctgagctggtgcgcatggtgggccgg
atgcgtttccgctcctcctacggccagaacttgctgcaacacagccgcgaagtagctaac
ctctgcgccacgatggccgccgagatgggcctcgatgtgaagaaagccaagcgcgccggt
ttgcttcatgacatcggcaaggtgagcagcgaggagcccgagctgccccacgccattttg
ggcatggagatggccaagaagtacaaggagcaccccgatgtggtgaacgccatcggggcc
caccacgacgagattgagatgacggccatgatttcgccgctcgtgcaggcctgcgatgcc
atttcgggctcgcgcccgggggcccgccgcgagatgatggagagctacatcaagcgcctc
aagcagttggaggaaacggccggcgcgttcaagggcgtgaaccagtgctttgccatccag
gccggccgcgagctgcgcgtgatggtggacgccgagaacgtgaccgacgagcgcgccgcg
gagctgagcttcgagatttcgcagaaaatcgagaaggaaatgcagtaccctggccagatt
aaaatcaccgtaatccgggaaatgcgctcggtggcctacgccaagtag
DBGET
integrated database retrieval system