KEGG   Hymenobacter nivis: DDQ68_19400
Entry
DDQ68_19400       CDS       T05498                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
hnv  Hymenobacter nivis
Pathway
hnv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hnv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DDQ68_19400 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hnv03019]
    DDQ68_19400 (rny)
Messenger RNA biogenesis [BR:hnv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DDQ68_19400 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B DUF4954 NttC KH_2
Other DBs
NCBI-ProteinID: AWM35512
UniProt: A0A2Z3GTW8
LinkDB
Position
4366077..4367744
AA seq 555 aa
MSTILLYCLLAAVVALVAGIVVGRQLAGKARQDLEGQAQVRAQQLLQEAEEKGNRIRDER
IQQSKDKNRQQRNDFEQESRRLKAELEAELTQRRQGVMEQEQGIKKLTETTQKQLEQLQR
KEKELEGAREKNQADTQQLRDKIEDQNEKRRATHEATLAELKQKEEEADNQLQTVQRQLE
TVANLTAAEAREQLVESLKNEAQLQASSFIKDTVAQAKLTATKDAKKIVLETIQRTASEH
AIENCVSVFNIESDDIKGKIIGREGRNIRALEAATGVEVIVDDTPEAIIISGFDPVRREI
ARLSLHLLVKDGRIHPARVEEIVAKTTKKIEEEIIEIGEKTVIDLGIHGLHPELVRMVGR
MRFRSSYGQNLLQHSREVANLCATMAAEMGLDVKKAKRAGLLHDIGKVSSEEPELPHAIL
GMEMAKKYKEHPDVVNAIGAHHDEIEMTAMISPLVQACDAISGSRPGARREMMESYIKRL
KQLEETAGAFKGVNQCFAIQAGRELRVMVDAENVTDERAAELSFEISQKIEKEMQYPGQI
KITVIREMRSVAYAK
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgtctaccatattattatactgtctgttggccgctgtggtcgcccttgtggcgggcata
gtggtgggccggcagctggccggcaaagcccggcaagaccttgagggccaggcgcaagtg
cgggcccagcaattgctccaggaagccgaagaaaaaggcaaccgcatccgcgacgagcgt
attcagcagtcgaaggacaagaaccgccagcagcgtaacgattttgagcaggaaagccgc
cgcctcaaagccgagctggaagccgagctgacccagcgtcgccagggtgtgatggagcag
gagcagggcatcaagaagctcaccgaaaccacgcagaagcagcttgagcagctgcaacgc
aaggagaaggagttggaaggggcccgcgagaaaaaccaggccgacacccagcagctgcgc
gacaagattgaggaccagaacgagaagcgccgcgctacccacgaagccacgctggccgag
ctgaagcagaaggaggaagaggctgataaccagcttcagaccgtgcagcgccaactcgaa
accgtagccaacctcaccgccgccgaggcccgcgagcagctcgtggaatcgctcaaaaac
gaggcccagctgcaagccagctccttcataaaggacaccgtggcgcaggccaagctgacg
gccaccaaggacgcgaagaagatcgtactggaaaccatccagcgtaccgcctcggagcat
gctattgagaactgcgtgtcggtgttcaacattgagagcgacgatattaagggcaaaatt
atcggccgcgaggggcgcaacattagggccctggaagcggccacgggcgtggaagtgatt
gtggacgacaccccggaagccatcatcatctcgggcttcgatccggtgcgccgcgaaatt
gcccgcctctcgctgcacttgctcgtgaaggacggccgtattcaccccgcccgggtggag
gaaatcgtggcgaaaacgaccaagaaaatcgaggaggaaatcatcgagattggcgagaaa
accgtcatcgaccttggcattcacggcttgcaccctgagctggtgcgcatggtgggccgg
atgcgtttccgctcctcctacggccagaacttgctgcaacacagccgcgaagtagctaac
ctctgcgccacgatggccgccgagatgggcctcgatgtgaagaaagccaagcgcgccggt
ttgcttcatgacatcggcaaggtgagcagcgaggagcccgagctgccccacgccattttg
ggcatggagatggccaagaagtacaaggagcaccccgatgtggtgaacgccatcggggcc
caccacgacgagattgagatgacggccatgatttcgccgctcgtgcaggcctgcgatgcc
atttcgggctcgcgcccgggggcccgccgcgagatgatggagagctacatcaagcgcctc
aagcagttggaggaaacggccggcgcgttcaagggcgtgaaccagtgctttgccatccag
gccggccgcgagctgcgcgtgatggtggacgccgagaacgtgaccgacgagcgcgccgcg
gagctgagcttcgagatttcgcagaaaatcgagaaggaaatgcagtaccctggccagatt
aaaatcaccgtaatccgggaaatgcgctcggtggcctacgccaagtag

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