Hymenobacter nivis: DDQ68_21030
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Entry
DDQ68_21030 CDS
T05498
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
hnv
Hymenobacter nivis
Pathway
hnv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DDQ68_21030 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hnv03400
]
DDQ68_21030 (xseB)
Enzymes [BR:
hnv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DDQ68_21030 (xseB)
DNA repair and recombination proteins [BR:
hnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DDQ68_21030 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DprA_WH
CobT
eIF-3c_N
Vps53_N
Paf1
RNA_pol_Rpc4
Motif
Other DBs
NCBI-ProteinID:
AWM35030
UniProt:
A0A2Z3H200
LinkDB
All DBs
Position
complement(4733344..4733718)
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AA seq
124 aa
AA seq
DB search
MPTYAESLAELETILRALETDAVDVDDLTARVERSAELIRRCRHKLRHAEASLDRVFDDL
DNDEEGPEPDEENDETDDEEIPEDDTDEEDDEENNDSESDDDSEDDDRDQAGGAGRPAPP
AWKF
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgcccacctacgccgaatctttagccgaactcgaaaccatcctgcgtgccctcgaaacc
gatgccgtggatgtggacgacctcacggcccgcgttgagcgctcggccgaactcatccgc
cgctgccgccataagctgcgccacgccgaagcctcgctcgaccgcgtatttgacgacctc
gacaatgacgaagagggccccgagcccgacgaggaaaacgacgaaacggacgatgaggaa
atacccgaagacgacaccgacgaggaagacgacgaggaaaacaacgacagcgagagcgac
gatgacagcgaggacgacgaccgcgaccaagccgggggcgctggccgccccgccccccca
gcctggaaattctag
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